Pairwise Alignments

Query, 303 a.a., sugar ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 290 a.a., Probable sugar-transport integral membrane protein ABC transporter UspA from Mycobacterium tuberculosis H37Rv

 Score =  105 bits (262), Expect = 1e-27
 Identities = 79/271 (29%), Positives = 131/271 (48%), Gaps = 9/271 (3%)

Query: 12  PLRKEKQQYVGMLYCLPYVVVFLMGTILPILYALYLSFFKERMVGGSRFVGLKNFVRAVS 71
           P R+    Y  +   L  VV FL+   LPIL  ++LS  +  ++G  R+VGL N+   ++
Sbjct: 5   PRRRTALAYALLAPSLVGVVAFLL---LPILVVVWLSLHRWDLLGPLRYVGLTNWRSVLT 61

Query: 72  DAKLWESFGRVSLYFLIQVPLMLALALLAALILDSGRIRHIAIPRMLLFLPYAVPGVIAA 131
           D+   +S    +++  I VP    L LLAA +L + R+    + R L  LP+    +  A
Sbjct: 62  DSGFADSLVVTAVFVAIVVPAQTVLGLLAASLL-ARRLPGTGLFRTLYVLPWICAPLAIA 120

Query: 132 LMWGYIYGQRNGLIGQFFQMFGAQAPNLLSADAMLFSISNIARWCFMGYNMLIFYASLRV 191
           +MW +I    +G I     + G +   L      L  +S +  W  +GY  L F A L  
Sbjct: 121 VMWRWIVAPTDGAIST---VLGHRIEWLTDPGLALPVVSAVVVWTNVGYVSLFFLAGLMA 177

Query: 192 IPGELYESARIDGASEFRIAWSVKIPMIRSTVIMTLLFSIIGSYQLFNEPNILKTLVPEV 251
           IP +++ +AR DGAS ++  W + +PM+R T+   L+  II + Q+F+    L    P+ 
Sbjct: 178 IPQDIHNAARTDGASAWQRFWRITLPMLRPTMFFVLVTGIISAAQVFDTVYALTGGGPQG 237

Query: 252 INSYYTPNMYTYNLAFTGQDINYAAAVSLVV 282
                   +Y    AF    I  A+ +++V+
Sbjct: 238 STDLVAHRIYAE--AFGAAAIGRASVMAVVL 266