Pairwise Alignments

Query, 911 a.a., valine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 953 a.a., valine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  231 bits (590), Expect = 1e-64
 Identities = 220/892 (24%), Positives = 364/892 (40%), Gaps = 131/892 (14%)

Query: 24  LEDKWRAVWDEDGTYKFRNTRDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRM 83
           +E      W+E G +K      + A YSI  PPP V+GSLH+GH F  T  D + R +RM
Sbjct: 10  IEQDLYKTWEEQGYFKPHGDTSKDA-YSIMIPPPNVTGSLHMGHAFQDTIMDTLIRCQRM 68

Query: 84  RGYDVFYPMGWDDNGLPTERRVQNYYGVRVDVSLPYDPDFKPPFEGTDGKKIDAKDQVPI 143
           +G +  + +G D  G+ T+  V+                             + K +   
Sbjct: 69  KGKNTLWQVGTDHAGIATQMVVERKIAAE-----------------------EGKTKHDY 105

Query: 144 SRKNFIELCEKLTAEDEKLFEALWRKLGLSIDWSQTYHTIGQHPRRVAQKAFLRNLARGE 203
            R  FI+   +  AE         R+LG S+DW +   T+     +  Q+ F+R      
Sbjct: 106 GRDAFIDKIWEWKAESGGTITKQLRRLGASVDWDRERFTMDDGFYKAVQEVFVRLYKDDL 165

Query: 204 AYQQDAPGLWDVTFQTAVAQAELESREYPGFYHKVAFRFEDGTP-------IYIETTRPE 256
            Y+      WD    TA++  E+E++E  G      +   DG         I + TTRPE
Sbjct: 166 IYRGKRLVNWDPKLHTAISDLEVENKETKGHMWHFRYPLADGVKTADGKDYIVVATTRPE 225

Query: 257 LLAACTSLIANPNDERYKQYFGQEVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVT 316
            +   T +  NP D RYK   G+E+  P+   ++PI+    A+M+KG G        D  
Sbjct: 226 TMLGDTGVAVNPEDPRYKDLIGKEIILPIVGRRIPIVGDEHADMEKGTGCVKITPAHDFN 285

Query: 317 DVEWWRDLKLPTRPIIQ-----RNGRIVMDTPDWITDPAGREVFAETAGKTTFSARKVIV 371
           D E  +  +LP   I+      R+   V ++    ++  G E+ A+  G   F+ARK IV
Sbjct: 286 DYEVGKRHQLPMINILTFDANIRDAAEVFNSNGEASNAYGTEIPAKYQGMERFAARKAIV 345

Query: 372 DKLRESGDLDGEPTPTKRMTNFYEKGDKPLEIVTSRQWYLKNGGTDEKLNAELIERGKEL 431
            +  E G L  E         + ++G   +E + + QWY++  G   K   E +E G ++
Sbjct: 346 AEFEELGLLQ-EIKDHDLTVPYGDRGGVVIEPMLTDQWYVR-AGILAKPAVEAVENG-DI 402

Query: 432 NFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNASGEPDYDRPITPSEDRLP 491
            F P      Y +W+  +  DW ISRQ ++G   P WY    +     +     +E+ + 
Sbjct: 403 QFVPKQYENMYFSWMRDIQ-DWCISRQLWWGHRIPAWYDEQGNVFVGRNEEEVRAENNIA 461

Query: 492 IDPTIDVPEGYDESQRDVPGGFTAEKDIMDTWATSSVTPQIVTHWAEPDEASQALFKSTF 551
            D  +                   + D++DTW +S++       W E         K   
Sbjct: 462 ADVAL-----------------RQDDDVLDTWFSSALWTFGTLGWPEKTPE----LKVFH 500

Query: 552 PMDLRPQGQDIIRTW----LFSTVDRAHLEN--KCLPWAHATLSGWILDPDHKKMSKSKG 605
           P D+   G DII  W    +  T+     E+    +P+    ++G I D +  KMSKSKG
Sbjct: 501 PTDVLVTGFDIIFFWVARMIMMTMHFCKDEDGKAQVPFKTVYVTGLIRDENGDKMSKSKG 560

Query: 606 NVVVP-------------------------------------NEPIEKFGADAVRY-WAA 627
           NV+ P                                        IE +G D++R+  AA
Sbjct: 561 NVLDPIDMIDGIDLESLVAKRTGNMMQPQLAAKIEKNTRKTFENGIEAYGTDSLRFTLAA 620

Query: 628 AARLGLDATYDIGQMKIGRRLAIKLLNATKFALAIGREDENHHVGEAAEASWNPADVTEP 687
            A  G D  +D+ +++  R    KL NA+++ L +  E+++      AE  ++ A     
Sbjct: 621 MASTGRDINWDMKRLEGYRNFCNKLWNASRYVL-MNTEEQDCGFAAGAELEYSLA----- 674

Query: 688 LDRAAMAKLALVVRQATEALEAYEHSKALEVIESYFW-QFCDDYIELVKNRAY-GTPDEQ 745
            D+   ++  L  ++    ++ +    A   +  + W QFCD Y+EL K   + GT  +Q
Sbjct: 675 -DKWIESQFELAAKEFNGHIDNFRLDMAANTLYEFIWNQFCDWYLELTKPVLWKGTEAQQ 733

Query: 746 GNVPSEKAVKSARTALGLGLDAFARLLAPYLPYASEEVWSWMH-----AGSGSVHRAAWP 800
                    ++ R  L   L+   RL  P +PY +E +W  +          ++   A P
Sbjct: 734 ---------RATRRTLITVLEKTLRLAHPVIPYITETIWQSVKPLVDGVEGDTIMLQALP 784

Query: 801 VVDPYVEAATGASPELLTWAGKAVEQLRKIKSEAKVSMKTPILSVALSAAAE 852
             D  V      + + + W    +  +R +++E  ++   P L V L AA E
Sbjct: 785 QYD--VANFNQEALDDIEWVKAFITSIRNLRAEYDINPGKP-LEVMLKAANE 833