Pairwise Alignments

Query, 911 a.a., valine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 879 a.a., Valyl-tRNA synthetase, class Ia (NCBI) from Rhodospirillum rubrum S1H

 Score =  238 bits (607), Expect = 1e-66
 Identities = 221/814 (27%), Positives = 335/814 (41%), Gaps = 99/814 (12%)

Query: 50  YSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRMRGYDVFYPMGWDDNGLPTERRVQNYY 109
           Y+I  PPP V+GSLH+GH  ++T  D + RY RM G D  +  G D  G+ T+  V+   
Sbjct: 36  YTIMMPPPNVTGSLHMGHALTFTLQDTLIRYHRMSGRDALWQPGSDHAGIATQMVVERQL 95

Query: 110 GVRVDVSLPYDPDFKPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAEDEKLFEALWRK 169
                                 GK I   D   + R+ FI    +  A      +   R+
Sbjct: 96  A---------------------GKGITRHD---LGREAFISKVWEWKAHSGGTIQRQLRR 131

Query: 170 LGLSIDWSQTYHTIGQHPRRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTAVAQAELESR 229
           LG S DW +   T+     +  +K F+R    G  Y+      WD    TA++  E+E R
Sbjct: 132 LGASPDWPRERFTMDDGLSKAVRKVFVRLHKDGLIYRDKRLVNWDPVLHTAISDLEVEQR 191

Query: 230 EYPG--FYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQEVYSPLFK 287
           E  G  ++ +     + G  I + TTRPE +   T++  +P DER+K   GQ V  PL  
Sbjct: 192 ETKGKLWHLRYPVDGQKGRFIVVATTRPETMLGDTAVAVHPEDERFKDLIGQFVMLPLAH 251

Query: 288 VKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWRDLKLPTRPIIQRNGRIVMDTPDWIT 347
            ++PI+A   A+  KG+G        D  D E  R   LP   I+  N ++  + P    
Sbjct: 252 RRIPIIADDYADPTKGSGAVKITPAHDFNDFEVGRRHNLPMINILDMNAKLNGNVPQ--- 308

Query: 348 DPAGREVFAETAGKTTFSARKVIVDKLRESGDLDGEPTPTKRMTNFYEKGDKPLEIVTSR 407
                       G   F AR  ++ +  E+ DL  +         + ++    +E   + 
Sbjct: 309 ---------AYQGLDRFVARDKVIAEF-EALDLLEKIEDNPMTQPYGDRSGVIIEPWLTD 358

Query: 408 QWYLKNGGTDEKLNAELIERGKE--LNFHPDFMRVRYENWVHGLNGDWLISRQRFFGVPF 465
           QW++       KL  E I   +E    F P      +  W+  +   W ISRQ ++G   
Sbjct: 359 QWFVDAA----KLAVEPIRAVEEGRTRFVPKHWENTFFEWMRNIQ-PWCISRQIWWGHQV 413

Query: 466 PLWYPVNASGEPDYDRPITPSEDRLPIDPTIDVPEGYDESQR------DVPGGFTAEKDI 519
           P WY                       D TI V E  DE++        V    T + D+
Sbjct: 414 PAWYGP---------------------DGTIFVEETEDEARTAAHDHYGVATELTRDTDV 452

Query: 520 MDTWATSSVTPQIVTHWAEPDEASQALFKSTFPMDLRPQGQDIIRTWLFSTVDRAHLENK 579
           +DTW +S++ P     W  PD+  +      +P D+   G DII  W+   +   H    
Sbjct: 453 LDTWFSSALWPFSTLGW--PDQTPE--LARYYPGDVLVTGFDIIFFWVARMMMMGHYVMG 508

Query: 580 CLPWAHATLSGWILDPDHKKMSKSKGNVVVPNEPIEKFGADAVRY-WAAAARLGLDATYD 638
            +P+    +   + D   +KMSKSKGNV+ P +  +++G DA+R+   A A  G D    
Sbjct: 509 DVPFRDVYIHALVRDEKGQKMSKSKGNVIDPLDMTDQYGTDALRFTLIAMAAQGRDIKMS 568

Query: 639 IGQMKIGRRLAIKLLNATKFALAIGREDENHHVGEAAEASWNPADVTEPLDRAAMAKLAL 698
             ++   R    KL NA +F         N  + +     ++P      L+R   AK   
Sbjct: 569 EQRVAGYRNFCTKLWNAARFC------QMNDCLPQPV---FDPTTARHTLNRWIGAKTED 619

Query: 699 VVRQATEALEAYEHSKALEVIESYFWQ-FCDDYIELVKNRAYGTPDEQGNVPSEKAVKSA 757
              +  EA+EAY  + A +V   + W  FCD Y+E+ K      P  QG     KA   A
Sbjct: 620 CAAKVAEAIEAYRFNDAAQVAYGFVWNTFCDWYLEMAK------PILQGEDGVTKAETQA 673

Query: 758 RTALGLGLDAFARLLAPYLPYASEEVWSWMHAGSGSVHRAAWPVVDPYVEAATGASPELL 817
             A    LD    +L P +P+ +EE+W  + A  G +  AAWP       AA  A  E +
Sbjct: 674 MAA--WVLDTILHILHPMMPFITEELWEKIAAREGQLITAAWPKGQGL--AAPEAEAE-M 728

Query: 818 TWAGKAVEQLRKIKSEAKVSMKTPILSVALSAAA 851
            W    V  +R +++E  V     I  V   A A
Sbjct: 729 DWVVGVVSAVRSVRAEMNVPPGARIPLVIKGATA 762