Pairwise Alignments

Query, 911 a.a., valine--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 959 a.a., valyl-tRNA synthetase from Paraburkholderia bryophila 376MFSha3.1

 Score =  227 bits (578), Expect = 3e-63
 Identities = 238/965 (24%), Positives = 385/965 (39%), Gaps = 167/965 (17%)

Query: 24  LEDKWRAVWDEDGTYKFRNTRDRKAVYSIDTPPPTVSGSLHVGHVFSYTHTDVIARYKRM 83
           +E  W   W E   Y   +    +  +SI  PPP V+G+LH+GH F+ T  D +ARY RM
Sbjct: 21  IEAHWGPEW-EKRAYAAPSFDGNRKDFSIQLPPPNVTGTLHMGHAFNQTIMDGLARYHRM 79

Query: 84  RGYDVFYPMGWDDNGLPTERRVQNYYGVRVDVSLPYDPDFKPPFEGTDGKKIDAKDQVPI 143
            G +  +  G D  G+ T+  V+                        D + +   D   +
Sbjct: 80  LGDNTLWVPGTDHAGIATQIVVERQ---------------------LDAQGVSRHD---L 115

Query: 144 SRKNFIELCEKLTAEDEKLFEALWRKLGLSIDWSQTYHTIGQHPRRVAQKAFLRNLARGE 203
            R+ F+E   +   E         R+LG SIDWS+ Y T+        +  F+R   +G 
Sbjct: 116 GREKFVERVWEWKQESGSTITNQVRRLGASIDWSREYFTMDDKMSAAVRDVFVRLYEQGL 175

Query: 204 AYQQDAPGLWDVTFQTAVAQAELESREYPGFYHKVAFRFEDGT-PIYIETTRPELLAACT 262
            Y+      WD    TAV+  E+ S E  G    + +   DG+  + + TTRPE +   T
Sbjct: 176 IYRGKRLVNWDPVLLTAVSDLEVVSEEENGHLWHIQYPLTDGSGHLTVATTRPETMLGDT 235

Query: 263 SLIANPNDERYKQYFGQEVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
           +++ +P DERY    G+ V  PL   +VPI+A    + + G G+       D  D +   
Sbjct: 236 AVMVHPEDERYAHLIGKTVTLPLSGREVPIIADDYVDREFGTGVVKVTPAHDFNDYQVGL 295

Query: 323 DLKLPTRPIIQRNGRIVMDTPDWITDPAGREVFAETAGKTTFSARKVIVDKLRESGDLDG 382
             KLP   I+  + +I  + P+            +  G   F ARK +V  L   G L+ 
Sbjct: 296 RHKLPQIEILTLDAKINDNAPE------------KYRGLDRFEARKQVVADLEALGALE- 342

Query: 383 EPTPTKRMTNFYEKGDKPLEIVTSRQWYLK----------NGGTDEKLNAELIERGKELN 432
              P K M    ++    +E + + QW++           N G      A  + R  E+ 
Sbjct: 343 SVKPHKLMVPRGDRTGVVIEPMLTDQWFVAMSKPAPEGTFNPGKSIAETALDVVRNGEIR 402

Query: 433 FHPDFMRVRYENWVHGLNGDWLISRQRFFGVPFPLWYPVNASGEPDYDRPITPSEDRLPI 492
           F P+     Y  W+  +  DW ISRQ ++G   P WY  N       +  +  +E+    
Sbjct: 403 FVPENWTTTYYQWLENIQ-DWCISRQLWWGHQIPAWYGENG------EIFVAKTEEGAHA 455

Query: 493 DPTIDVPEGYDESQRDVPGGFTAEKDIMDTWATSSVTPQIVTHWAEPDEASQALFKSTFP 552
                       ++    G    ++D++DTW +S++ P     W  P+E  +   K   P
Sbjct: 456 ----------KAAEAGYTGPLKRDEDVLDTWFSSALVPFSSLGW--PNETQE--LKHFLP 501

Query: 553 MDLRPQGQDIIRTWLFSTV-DRAHLENKCLPWAHATLSGWILDPDHKKMSKSKGNVVVPN 611
             +   G DII  W+   V    H   K +P+    + G + D + +KMSKSKGN + P 
Sbjct: 502 SSVLVTGFDIIFFWVARMVMMTTHFTGK-VPFDTVYVHGLVRDAEGQKMSKSKGNTLDPI 560

Query: 612 E-------------------------PIEK------------FGADAVRY-WAAAARLGL 633
           +                          IEK            FG DA+R+  A+ A LG 
Sbjct: 561 DIVDGIGLDALVAKRTTGLMNPKQAASIEKKTRKEFPDGIPAFGTDALRFTMASMATLGR 620

Query: 634 DATYDIGQMKIGRRLAIKLLNATKFAL--------AIGREDENHHVGEAAEASWNPADVT 685
           +  +D+ + +  R    KL NAT+F L          G+ ++    G     +++ A   
Sbjct: 621 NVNFDLARCEGYRNFCNKLWNATRFVLMNCEGHDCGFGKPEQCGECGPDGHLNFSSA--- 677

Query: 686 EPLDRAAMAKLALVVRQATEALEAYEHSKALEVIESYFW-QFCDDYIELVKNRAY-GTPD 743
              DR  +++L  V  +       Y        +  + W ++CD Y+EL K +   G P+
Sbjct: 678 ---DRWIVSRLQRVETEIARGFADYRFDNVANALYKFVWDEYCDWYLELAKVQIQTGQPN 734

Query: 744 EQGNVPSEKAVKSARTALGLGLDAFARLLAPYLPYASEEVWSWMH--AG---SGSVHRAA 798
           +Q         ++ R  L   L+   RL  P +P+ +E +W  +   AG    G     A
Sbjct: 735 QQ---------RATRRTLLRVLETVLRLAHPVIPFITEALWQKVAPLAGRYPEGKAEGEA 785

Query: 799 WPVVDPY-VEAATGASPELLTWAG---KAVEQLRKIKSEAKVS--MKTPILSVALSAAAE 852
             +V PY V   +    +   WA      ++  R ++ E  +S  +K P+L       A 
Sbjct: 786 SIMVQPYPVAEMSKLDEDAEQWAADLKAVIDACRNLRGEMNLSPAVKVPLL-------AT 838

Query: 853 GVDAIHAALGDIAQAGRVIGKFDLVAKHTA-ESAAEDAP-------------ETEVAVET 898
           G           AQA   + +  ++A   A ++ A+ AP             E +VAVE 
Sbjct: 839 GNAERLRTFAPYAQALARLSEVQIIADEAALDAQADGAPIAIVGSDKLVLKVEIDVAVER 898

Query: 899 SELGE 903
             L +
Sbjct: 899 ERLSK 903