Pairwise Alignments

Query, 401 a.a., MFS transporter from Bifidobacterium breve UCC2003

Subject, 404 a.a., Arabinose efflux permease from Sphingomonas koreensis DSMZ 15582

 Score =  172 bits (436), Expect = 2e-47
 Identities = 120/387 (31%), Positives = 193/387 (49%), Gaps = 10/387 (2%)

Query: 12  RRIFPILLIAEGLCLSGMSVDLTITSLAGSSLAPAPWMATFPIACIFIGTVIGTPAMGRL 71
           RR   IL +A+ L LS +SV  T + L G++LAP P +AT P+A   + T I T     L
Sbjct: 6   RRPVVILSVAQALYLSALSVIFTFSGLVGATLAPMPSLATLPLALSTVVTAITTIPASIL 65

Query: 72  VGRFGYRQVFVFGALLAVLGGISSATALRFHQFPLLCIGTFCVGIYQSGTNYYRYAAAD- 130
           + R G R  F  GAL+   G   +A  +    F L C G   +G++Q+   YYR+AAAD 
Sbjct: 66  MARIGRRAGFQLGALVGAAGAGFAAWGIAGSNFALFCFGNALIGVFQASAMYYRFAAADL 125

Query: 131 SMPGKESKAINGILSAGAIASIIGP-VLATFFGTATSIEYEGSYYVVSVLAACAVIVLLV 189
           + P    KA++ +L+ G  A+++GP V A       ++EY G+Y   ++LA  ++ VL  
Sbjct: 126 AAPEFRPKAVSWVLAGGVAAAVVGPEVAARTRALVPAVEYMGAYLAAALLAFLSIAVLTA 185

Query: 190 LPKIQSPTPSHMRDKAIASTTPNYPALLTRPRFVLGATISFVASFVMVLVMSGAPIVLES 249
           L   ++P PS +   A A   P    ++ +P FV+ A  + VA  VM  VM+ +P+ + +
Sbjct: 186 L---RAP-PSALEAHASARGRP-LLVIMRQPVFVVAALNAAVAYIVMSFVMTASPLAVVA 240

Query: 250 TFSQNAQTRMVAMQLHMVGMYLPTLFAIFIFHKKNSEMAQALTGLIVGMLGTVVALAASA 309
                        + H+VGM+ P+ F   +  +          GLI+      +AL+ SA
Sbjct: 241 A-GHGVDAAAGVTRWHLVGMFAPSFFTGGLIARFGVLPILVAGGLILS-TSLAIALSGSA 298

Query: 310 SYAVTLDLLLIGISWSLCYAAGSALLTKSYAESERSWARGVGELAPVLGQVLGSVLAGVL 369
             A  + LLL+G+ W+  +  G+ LLT++Y  +ER+  +   E        L ++ AG +
Sbjct: 299 LLAFQVALLLLGVGWNFLFIGGTTLLTEAYEPAERARTQAANEFLVFGTTALATLTAGTI 358

Query: 370 -LAAGWKTVFVTVLAMIVCALIAMAGY 395
               GW TV    +  ++ A  A A +
Sbjct: 359 QTGQGWATVNFAAIPALLIAGFATAWF 385