Pairwise Alignments

Query, 421 a.a., signal recognition particle-docking protein FtsY from Bifidobacterium breve UCC2003

Subject, 510 a.a., cell division protein FtsY (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  245 bits (625), Expect = 3e-69
 Identities = 155/386 (40%), Positives = 222/386 (57%), Gaps = 21/386 (5%)

Query: 40  KTAPDDKRTRDAKAAADARLTAEAEAAKESEKAGGAA-AGTAATGKSTADAESVSPAAKP 98
           K   + +  R A+  A+    AE +AA+ +  A   A A   A  K+ A+   V    + 
Sbjct: 132 KAQAEVEALRLAEEQAEVARLAEQQAAEATRLAAEQALAEQLAAEKAEAEQIQVEQPLEQ 191

Query: 99  AVAESTAEPAKTETPESVGSRLTRLKAKLAKSGNPFGKALFDILAKDNLSESDWEDVEDT 158
              E  A+PAK        S   RLK  L ++    G     +     + +  +E++E+ 
Sbjct: 192 Q-PEPQAKPAKE-------SFFARLKRGLMRTSENIGSGFIGLFRGKKIDDELFEELEEQ 243

Query: 159 LLLADVGAEASAQLVDDLKTDARITGKADPAEVRATLKD---KLLDLVGRDTDRRLNVEK 215
           LL+ADVG E + +L+  L   A      D   +   L+D   K LD V       + +  
Sbjct: 244 LLIADVGVETTGRLIKSLTEHASRKQLKDAEALYDLLRDEMQKTLDPVA------IPLVP 297

Query: 216 PGANKPGVIIMVGVNGTGKTTTAGKLARLFVSEDKQVIMGAADTFRAAAADQLETWGTRV 275
             AN P VI+MVGVNG GKTTT GKLA+ +  + K V++ A DTFRAAA +QL+ WG R 
Sbjct: 298 ENANGPFVILMVGVNGVGKTTTIGKLAKQYQRQGKSVMLAAGDTFRAAAVEQLQVWGQRN 357

Query: 276 NVPVVRADKDGADPASVAFEASAKAKEANADVLIIDTAGRLQNKANLMDELGKIRRVTEK 335
           N+PVV A   GAD ASV F+A   AK    DVLI DTAGRLQNK++LM+EL K+ RV +K
Sbjct: 358 NIPVV-AQHTGADSASVLFDALQAAKARKIDVLIADTAGRLQNKSHLMEELKKVVRVMKK 416

Query: 336 NLPV--DEVLLVLDATTGQNGMAQAKVFAEAIGITGVVLSKLDGSAKGGIVISVQKELGV 393
             P    EV+L LDA+TGQN ++QA++F EA+G+TG+ +SKLDG+AKGG+V ++  +  +
Sbjct: 417 LDPEAPHEVMLTLDASTGQNAISQAQLFQEAVGVTGMTISKLDGTAKGGVVFAIADKFKI 476

Query: 394 PVKLVGLGEGPDDLAPFDPEGFVDGI 419
           P++ +G+GE  DDL  F+ + F+D +
Sbjct: 477 PLRYIGVGEQIDDLRTFNSKEFIDAL 502