Pairwise Alignments

Query, 315 a.a., carbohydrate ABC transporter permease from Bifidobacterium breve UCC2003

Subject, 277 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (281), Expect = 8e-30
 Identities = 72/256 (28%), Positives = 116/256 (45%), Gaps = 5/256 (1%)

Query: 60  LIFVFPLYYALSIASQNTPSNQYGVRALIPGTALLHNLSRALGELKFWQALGGTVTVAVV 119
           +++  PL YA+  A      + Y  R  +     L N   A     F      TV +  +
Sbjct: 26  IMWALPLLYAIWTAFH---PSAYSTRFTLNAPLTLENFVTAWHAAPFALYFVNTVLLVTM 82

Query: 120 VSVSTVFFSTLAGYSFAKLHFRGRSVLLTAVVATMTIPQQLTVVPLYIMANKAGLYGNLL 179
           V  + +   TLA Y+FAK  FRG++++   V+  + I   + VV  Y      G+  + L
Sbjct: 83  VLAAQLVLCTLAAYAFAKYDFRGKNIMFALVLMQLMIMPDVLVVENYRTMASIGVLDSTL 142

Query: 180 AVIIPGLVSAFGVFWMTQYITDALPYELIEAARVDGCSMFRTFISVGVPAARPAASMLFL 239
           A+ +P + SAFG+F + Q    ++P EL EAA V+G S  +    V VP  +P      L
Sbjct: 143 AIGLPYMASAFGIFLLRQTF-KSIPKELDEAAAVEGASTLQILWKVYVPLGKPVYLAYAL 201

Query: 240 FTFIGQWTNYFWPMLVLGANKSYMLTTAAAALKGA-YFTDYTIVMSGVILTTAPLLLLFF 298
            +    W N+ WP++V     S  LT             D+ I+ +  ++T+ PLL+ F 
Sbjct: 202 VSISYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWAIITAATLMTSGPLLVAFL 261

Query: 299 VAGKQLVAGIMAGAVK 314
           +  +Q V   M   +K
Sbjct: 262 LFQRQFVQSFMRAGIK 277