Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 335 a.a., DNA-binding transcriptional regulator GalS from Vibrio cholerae E7946 ATCC 55056

 Score =  124 bits (311), Expect = 3e-33
 Identities = 96/338 (28%), Positives = 156/338 (46%), Gaps = 20/338 (5%)

Query: 7   ATIRDVAKRAGVAVSTASRALSHG-SASKATREKVFRAAGELNFVPNPAARQLMSGRSNI 65
           ATI+DVA+ AGV+V+T SR ++    AS+A+ + V  A  +L + PN AAR L++  +N 
Sbjct: 2   ATIKDVAREAGVSVATVSRVINKSPKASQASIDTVTSAMHKLGYRPNAAARALVNQSTNT 61

Query: 66  VAIAIPEHTDFIFRDMFVAGILGELSRAFSERRMLPFLALTELQDTESLER---LLRDSS 122
           + + + + +D  F      G L +     + R     L        E   R   LL +S 
Sbjct: 62  IGVLVSDVSDPFF------GTLVKAVDTVAHREGKHLLIGNGYHRAEEERRALELLINSR 115

Query: 123 ADGVVVLSFHYSRQLAQVFHDFDKPTVFIGRPFPRMRYPYVDVDNEGAAYCAAELLVERG 182
            D +V+ S     +    + +  K  V I R  P++    + +DN+  AY A + L+ +G
Sbjct: 116 CDALVIHSKALPNEELIEYANEVKTLVLINRHIPQLADRCISLDNQKGAYLATDFLIRQG 175

Query: 183 RRNIGIIAGPDDMMAPKQRTMGCVNGLADQGMKPLAVISGEYT------AEHGFEACERI 236
            RNI  I+    +    QR  G    L + G+     +S  Y       +E G +A   +
Sbjct: 176 HRNIACISSSHQIEDADQRIAGYQQALNEHGI----TLSSSYIEKASPDSEGGEQAMTNL 231

Query: 237 LEQYPEVDGVFAQSDQIAVGVLQALAKHGRQVPNDVSVIGFDDFPVATMTNPKLTTFAQP 296
           L +      V A +D +A G L  L ++G  VP  VSVIGFDD  ++    P+LTT   P
Sbjct: 232 LVKSLPFTAVVAYNDNMAAGALLVLEENGHSVPEHVSVIGFDDALISRYLRPRLTTVRYP 291

Query: 297 LHDMAQVIAEMLCWRLEHGEWNTVAQVLPASLIKRDSV 334
           +  MA+   ++               +   ++++RDSV
Sbjct: 292 IQLMAEKATQLALALATDAPRENDPMIFSPTIVRRDSV 329