Pairwise Alignments

Query, 350 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Klebsiella michiganensis M5al

 Score =  102 bits (255), Expect = 1e-26
 Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 13/294 (4%)

Query: 4   MRDVAKTAGVSLSTVSLVVNNTGYVSDDMRAKVEAAMRQLNYIPNELARNLYRNRTNTIG 63
           M+DVA+ A VS +TVS  + N   VS   R +VE A  ++ Y+P  L RN+ RN + TI 
Sbjct: 12  MKDVAQKANVSTATVSRALMNPDKVSQSTRNRVEQAALEVGYLPQSLGRNMKRNESRTIL 71

Query: 64  VIMPTIAHPFFATLTAHLQREFAARDLKTLLCSIADADKGEGEYVDMLQRHMMDG-IVMA 122
           VI+P I  PFF+ +   ++   A ++   L+   A  ++ E  ++D++    +DG +++ 
Sbjct: 72  VIVPDICDPFFSEIIRGIEVTAAEQEYLVLIGDCAHQNRQEKTFIDLIITKQIDGMLLLG 131

Query: 123 AHTEHPGGYWTSIHRP--IVAFDRTLGEGVPAVRSDHEQGGRLIARQLIDSGARHVVLVG 180
           +      G     + P  ++A +      +P V  D+          L + G R +  + 
Sbjct: 132 SRLPFDAGVEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFNAVNYLHELGHRRIGCIA 191

Query: 181 GPRSQFAEATTFPTIRYHLT-VERMLADAGIACD--YVEAGIVADICAHEATARAIFERY 237
           GP          P   Y L    + L  +GI  D  Y+  G         A  + +    
Sbjct: 192 GPEE-------MPLCHYRLQGYVQALRRSGITVDPHYIARGNFTYEAGASALEQLLALPV 244

Query: 238 SDVDAIVGSDLVASVALQEALRRGISVPRDLQIIAYDGTFMAETAGMRLTAVRQ 291
                   SD++A  AL  A RRG+ VP DL II +D   ++E     LT V Q
Sbjct: 245 PPTAIFCHSDIMALGALSLAKRRGLKVPEDLSIIGFDNISLSEFCDPPLTTVAQ 298