Pairwise Alignments

Query, 350 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 327 a.a., transcriptional regulator RbsR from Klebsiella michiganensis M5al

 Score =  111 bits (278), Expect = 2e-29
 Identities = 80/297 (26%), Positives = 140/297 (47%), Gaps = 18/297 (6%)

Query: 4   MRDVAKTAGVSLSTVSLVVNNTGYVSDDMRAKVEAAMRQLNYIPNELARNLYRNRTNTIG 63
           M+DVA+ AGVS STVS V+N   +VS+ + AKV+AA++ LNY P+ LAR+L  N+T TIG
Sbjct: 1   MKDVARIAGVSTSTVSHVINKDRFVSEAITAKVDAAIKSLNYAPSALARSLKLNQTRTIG 60

Query: 64  VIMPTIAHPFFATLTAHLQREFAARDLKTLLCSIADADKGEGEYVDMLQRHMMDGIVM-- 121
           +++    +PF++ L   ++R    R    +LC+    ++     ++ L +  +DG+++  
Sbjct: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120

Query: 122 -AAHTEHPGGYWTSIHRPIVAFDRTLGEGVPAVRSDHE-QGGRLIARQLIDSGARHVVLV 179
              H   P         P V  D    +G   +  D+   GG +  + LID G   +  +
Sbjct: 121 TETHQPSPEIMQRYPSVPTVMMDWAPFDGDSDLIQDNSLLGGDMATKYLIDQGYTRIACI 180

Query: 180 GGPRSQFAEATTFPTIRYHLTVERMLADAG--IACDYVEAG---IVADICAHEATARAIF 234
            GP  +          +  +    +    G  I+ D+   G    +  +    A  +A+F
Sbjct: 181 AGPLDKTPARLRLEGYQAAMARAGLTVPEGYVISSDFEFGGGFSAMQKLLTLSALPQAVF 240

Query: 235 ERYSDVDAIVGSDLVASVALQEALRRGISVPRDLQIIAYDGTFMAETAGMRLTAVRQ 291
                    +G+D +A  A Q   + G+ +P+D+ ++ YD   +A      LT + Q
Sbjct: 241 ---------IGNDAMAVGAYQALYQGGLRIPQDMALVGYDDIELARYMTPPLTTIHQ 288