Pairwise Alignments

Query, 350 a.a., LacI family transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 332 a.a., transcriptional regulator, LacI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 96.7 bits (239), Expect = 8e-25
 Identities = 88/299 (29%), Positives = 141/299 (47%), Gaps = 21/299 (7%)

Query: 2   VGMRDVAKTAGVSLSTVSLVVNNTGYVSDDMRAKVEAAMRQLNYIPNELARNLYRNRTNT 61
           V +++VA+ AGVS S VS        VS   R KVE A  +L Y PN LA +L   RT  
Sbjct: 3   VTLKEVAERAGVSRSAVSRTFTEGASVSPKTRRKVEKAAVELGYRPNALASSLTTGRTKL 62

Query: 62  IGVIMPTIAHPFFATLTAHLQREFAARDLKTLLCSIADADKGEGEYVDMLQRHMMDGIVM 121
           IG+I     +P F  +     R    R L+ LL +++D +  E   + ML+++ +DG+++
Sbjct: 63  IGLISNNFRNPLFLEVFDLFTRLLQERGLRPLLVNLSDENDPENS-ISMLRQYSVDGVIV 121

Query: 122 AAHTEHP--GGYWTSIHRPIV-AFDR-TLGEGVPAVRSDHEQGGRLIARQLIDSGARHVV 177
           A+ T  P     +     P+V +F R      V  V  D+ + GR+ AR L+  G   + 
Sbjct: 122 ASSTLPPSFSKAFRDAGIPVVHSFGRFASAPHVHVVGIDNIECGRMAARTLLARGYHKIG 181

Query: 178 LVGGPRSQFAEATTFPTIRYHLTVERM----LADAGIACDYVEAGIVADICAHEATARAI 233
            +GGPR   A +T      +H  V R     ++++  A    +AG          T  + 
Sbjct: 182 FMGGPRE--ATSTIDRREGFHQVVARRNGIEVSESFAAAYSFDAG---------KTEMSR 230

Query: 234 FERYSDVDA-IVGSDLVASVALQEALRRGISVPRDLQIIAYDGTFMAETAGMRLTAVRQ 291
             ++   +A   G D+++  AL      G+ VP+D+ II  +   MA  + + LT +RQ
Sbjct: 231 LLQHGPAEAYFCGDDVLSIGALAAIEAAGLRVPQDVGIIGLNDMEMAGWSNLDLTTIRQ 289