Pairwise Alignments

Query, 815 a.a., glycogen/starch/alpha-glucan family phosphorylase from Bifidobacterium breve UCC2003

Subject, 837 a.a., glycogen phosphorylase family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  623 bits (1606), Expect = 0.0
 Identities = 346/787 (43%), Positives = 474/787 (60%), Gaps = 19/787 (2%)

Query: 34  QATAADVYVAVSKAVRNHLADSWFKTQADTVNGNTKAVGYLSAEFLMGKQLENALLNAGL 93
           +    +++ A++ +V+  + D W +T+    + + K V YLS EFLMG+ L NALL+  L
Sbjct: 57  EGARGELFQALALSVKEQMLDDWRETRIKDSHYDNKQVAYLSLEFLMGRTLGNALLSLDL 116

Query: 94  TDQFDKAVEALGFKPKDIVDAEYEPGLGNGGLGRLAACFIDSLASLGVPAFGYGIQYKYG 153
                +A+       +++ +AE++ GLGNGGLGRLAACF+DS ASL +   GYGI+Y+YG
Sbjct: 117 EQDSREALSHYSVSLEELEEAEHDAGLGNGGLGRLAACFLDSCASLDLSVTGYGIRYEYG 176

Query: 154 IFKQKFDENGKQVETPDYWLANEEPWGRTDYNRDQKVSFGGKVVENAD--GTK--TWEPA 209
           +F QK  + G QVE PD WL    PW     + +  V F G      D  G +   W   
Sbjct: 177 MFAQKIVD-GYQVERPDRWLREGNPWEVRVPHHNVTVHFFGHTESYVDKQGRRHVIWVDT 235

Query: 210 WSVRAVPVDYMVPGYKSQRVNTLRLWTAKSYDEFDLLSFNRSEYMDAVAPQVKAENISKI 269
             V AV  D  VPGY++ R+NTLRLW A++ D+FDL  FN+ +Y +AVA +  AE I+ +
Sbjct: 236 QDVLAVAYDMPVPGYRNGRINTLRLWKAEATDDFDLAEFNQGDYTEAVARKNLAEQITMV 295

Query: 270 LYPEDSTKVGKELRLEQQYFFVSASLHDAIR--VFYPGQDKPDLTTFPNKIVFQLNDTHP 327
           LYP D+++ GKELRL QQYF  SASL   ++  V + G D    T F  K V QLNDTHP
Sbjct: 296 LYPNDASENGKELRLRQQYFLSSASLQAILKRWVHHHGHD---FTQFAAKNVMQLNDTHP 352

Query: 328 VIGIPELMRILIDEYGYDWDTAWSITTKTFNYTCHTLLPEALEVWPASLIGELLPRHLEI 387
            I +PELMR+L+DEY  +WD AW+IT +T  YT HTLLPEALE WP  ++  +LPR LEI
Sbjct: 353 SIAVPELMRLLVDEYALEWDAAWAITRQTMAYTNHTLLPEALERWPVRMMALMLPRILEI 412

Query: 388 IEKINAQFEAELAAKGV-DKDTIKDMAIYTGDA---VRMAYLATYGGSHVNGVAELHSQL 443
           I +INA++   +A     D D +  M+I        VRMAYLA      VNGVA LH+QL
Sbjct: 413 IYEINARYLDLVAHHWPGDADKLASMSIIQEGPDPHVRMAYLAIVASFSVNGVAGLHTQL 472

Query: 444 LKDVTLKNFSDVYPDKFTNVTNGVTPRRFIRLANPRLSDLITEGLGTDKWVADLELLKGL 503
           LK    K+F  ++P KF N TNGVTPRR++   NP L+ L++  LG   WV DL  L  L
Sbjct: 473 LKSGLFKDFYSLWPQKFNNRTNGVTPRRWLAHCNPALAKLLSSHLG-QSWVTDLSQLMAL 531

Query: 504 EPLAKDDEFVKKFAAVKKANKHAFVGFAKDHYGIDIDENTLFNTMVKRLHEYKRQSLKIL 563
             L +D  F++++  VK+ NK           G++ D + LF+  VKR+HEYKRQ L IL
Sbjct: 532 NALTQDASFIQQWREVKQGNKVLLANMIAKECGVEFDPSMLFDVQVKRIHEYKRQLLNIL 591

Query: 564 AVISNYADIKSGKVKAEDITPRTVFFGAKAAPGYYLAKMTIELINNVSRVISSDPAVKGK 623
            VI  Y  I+ G    E + PR V  G KAAPGY++AK+ I+L +NV+ +++SDP V   
Sbjct: 592 HVIHLYHQIQQGHT--EHLVPRCVLIGGKAAPGYFMAKLIIKLASNVAHMVNSDPVVAPY 649

Query: 624 LAVHMLPNYNVEMAQNLIPATELDEQISQAGKEASGTGNMKFALNGALTVGTLDGANVEI 683
           L    LPNYNV   + + P T++ EQIS AGKEASGTGNMKF +NGALT+GTLDGAN+E+
Sbjct: 650 LRFAFLPNYNVSAMEKICPGTDVSEQISTAGKEASGTGNMKFMMNGALTIGTLDGANIEM 709

Query: 684 RERVGAENFFLFGMTVDEVEKKYAEGYNPASYYEADPRLKQAIDLVADGTFSNGDRNAYS 743
            E VG E+FFLFG+  ++V       Y P         L + + L+  G F+  +   + 
Sbjct: 710 LEEVGEESFFLFGLNAEQV-AAMRSNYQPKRIIAQSHALSEVMALLKSGHFNLLEPGIFD 768

Query: 744 PLVAD-WLTKDWFMTLADFSAYMGIQSEIEALYADELEWNRKALLNVANSGYFSSDRSME 802
           P++     + D +MT ADF +Y   Q  +   Y D+ +W + ++ N A SG FSSD ++ 
Sbjct: 769 PIITSIESSDDQWMTAADFDSYRLAQEAVANTYKDQQKWTQMSIRNTAASGRFSSDVTIA 828

Query: 803 DYLERIW 809
            Y + IW
Sbjct: 829 GYRDEIW 835