Pairwise Alignments

Query, 363 a.a., tryptophan--tRNA ligase from Bifidobacterium breve UCC2003

Subject, 329 a.a., tryptophanyl-tRNA synthetase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  192 bits (487), Expect = 1e-53
 Identities = 131/325 (40%), Positives = 177/325 (54%), Gaps = 13/325 (4%)

Query: 42  LTGDRPTGRLHLGHYFGSIRERVAMQERGVNTNIIIADYQVIT-DRDTTEHIQDNVLNLV 100
           ++G RPTG LHLGHYFG ++  V MQ   +     +AD+  +T D      I++ V  LV
Sbjct: 9   VSGMRPTGPLHLGHYFGVLKNWVEMQHE-MEAFFFVADWHALTSDYADPSRIREFVPELV 67

Query: 101 LDYMAAGIDPNKTMMFTHSAVPAENQLLLPFLSLVTEAE-LHRNPTVKSEMEASGHALTG 159
            D++AAG+DP K +MF  S +    +L L  LS++T    L RNPT K + +   +   G
Sbjct: 68  TDWVAAGLDPEKCVMFQQSHIKEHAELHL-ILSMITPVSWLERNPTYKEQKQEVVNKDLG 126

Query: 160 L--LLTYPVHQACDILFCKANVVPIGKDNLPHVEITRTIARRFNERYAKKNPVFPEPAAI 217
               L YPV  A DIL      VP+G+D LPH+E+TR IARRFN  Y      FPEP A 
Sbjct: 127 NYGFLGYPVLMASDILIYHPKWVPVGQDQLPHLELTREIARRFNFLYGD---YFPEPEAR 183

Query: 218 LSEAPEIPGLDGRKMSKSYGNSIMLGATAEETAKLIKKSPTDSERRITFDPVARPQVSAL 277
           L+ A + PGLDGRKMSKSYGN+I L  T EE A  ++   TD+ R    DP   P V  L
Sbjct: 184 LTPAAKCPGLDGRKMSKSYGNAIYLRDTMEEIAPKVRGMFTDTNRLRKSDP-GNPDVCNL 242

Query: 278 LTTAGLVTGRDPK-DIAEEIGDSGAGAL--KAYVIESVNEFLAPHRERRAELAKDMDSIR 334
                L+   + + +I +    +  G +  K   +E++  FL P  ERRA L  +   I+
Sbjct: 243 FPYHELMASPEQQAEIRQGCTSASLGCVDCKKIFLENLGAFLGPLHERRAALLANPKGIQ 302

Query: 335 DILHDGNKRANAIAEETLDQVRDAM 359
           DIL  G+ RA A A   +  VRD +
Sbjct: 303 DILDAGDTRARAEASRIMAGVRDRL 327