Pairwise Alignments

Query, 539 a.a., amidohydrolase from Bifidobacterium breve UCC2003

Subject, 604 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 73.9 bits (180), Expect = 2e-17
 Identities = 119/501 (23%), Positives = 186/501 (37%), Gaps = 56/501 (11%)

Query: 83  INADGLWIIPGLWDCHTH-FTQWAKTLGRLDLINARSAAEAMDMLHRHLDERRAAGTLDP 141
           +N +G  +IPG  D H H F    + L    L         +  L R L           
Sbjct: 76  VNLNGKTLIPGFIDGHGHVFNTGIQALSANLLALPDGHVNDIAALQRELTVWAKKPENAK 135

Query: 142 DAFVVGMRFRHSLWADDEQPTLAAIDAVTGDQPVALSSADMHCGWVNSAAARRLGVHVD- 200
              ++G  +  S  A+   PT   +DAV+ D P+ +     H   +N+ A    G + + 
Sbjct: 136 HGIILGFGYDDSQLAEQRHPTRQELDAVSNDIPILIIHQSGHLATLNTKALTLAGFNSNS 195

Query: 201 ---ESGLVGELEWFNAYTAFDKAP-GAAEETDRL---------LREAEQDA---ASKGVV 244
              E G +          A  K P G  EET            L E E +A   A   + 
Sbjct: 196 KDPEGGKIRR-------EADGKTPNGVLEETAFFGTLLPLFAKLNETENEAIFNAGMKLY 248

Query: 245 GIRDYEMAENIDTWIKRFKAGVN-----NLRVDAGVYPERLQAAIDAGWHTGRELPDSNG 299
               Y  A+         K   N      L +D   YP+ +Q A +           +NG
Sbjct: 249 ASFGYTTAQEGRASSSAVKTMYNLAQQQKLPIDVAAYPD-IQTAQEVIAPPYFSAHYNNG 307

Query: 300 LGRVGAMKLISDGSLNTRSAYCSTPYS----GIEPPTYGTMSYAPQQIEDYMRLATEHGF 355
             RV   KL  DGS   ++A+ + PY     G EP   G  S + ++  +Y+ LA   G+
Sbjct: 308 F-RVAGAKLNLDGSPQGKTAWLTKPYLIPPVGQEPDYKGYPSMSDEKAAEYIALAQSKGW 366

Query: 356 DIACHAIGDEA-NTIVLNAAAATHAHGSIE------HAQMLKPVDIPRFAELGLTASIQP 408
            +  H  GD A + ++    A+   +G  +      HAQ  +   I RF  LG+  S  P
Sbjct: 367 QLLTHVNGDAAIDQLLKGIEASEKIYGKPDRGFVAIHAQTARQDQIERFKRLGVFPSFFP 426

Query: 409 QHAM--DDRDVITRFWANPAGIPYPFNALHDAGAMLRMGSDAPVAPLDPWLAISAAVFGT 466
            H     D  + +      A    P     + G +     D+PVA  +     SA V   
Sbjct: 427 MHTFYWGDWHMDSVLGKERAQNISPTGWARELGMIYTSHHDSPVALPNSMRVYSATVNRI 486

Query: 467 ESSDR-----EPFQPEQCLDVRTSLAAS---TAMGRDHLAVGDPADVVLLDTDPYFVSAP 518
             + R     +   P + L  +T  AA+       +  L VG  AD+V+L  +P  + A 
Sbjct: 487 SRTGRVLGPAQKASPLEGLKSQTIWAATQYKEEESKGSLEVGKLADLVILSDNPLTIPAE 546

Query: 519 EAMRAMSEHVVMTLLRGERMY 539
              +     ++ T+  G+ +Y
Sbjct: 547 ---KLADIQIIETIKEGKTVY 564