Pairwise Alignments

Query, 539 a.a., amidohydrolase from Bifidobacterium breve UCC2003

Subject, 577 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 23/231 (9%)

Query: 304 GAMKLISDGSLNTRSAYCSTPYSGIEPPTYGTMSYAPQQIEDYMRLATEHGFDIACHAIG 363
           G +KL +DG++ +++   + P  G      G     P    ++ R     G+ I  H  G
Sbjct: 327 GGIKLFADGAMFSQAMQINAP--GYIDGHKGEWITQPSSFVEFARSYWNAGYQIHVHTNG 384

Query: 364 DEANTIVLNAAA--------ATHAHGSIEHAQMLKPVDIPRFAELGLTASIQPQHAMD-- 413
           D    +VL+           A H   ++EH          R A+L    S  P +  D  
Sbjct: 385 DGGAKMVLDTLQELENDKPRADHRF-TVEHYGYADDGTSRRIAKLDAQVSANPFYLFDLG 443

Query: 414 DRDVITRFWANPAGIPYPFNALHDAGAMLRMGSDAPVAPLDPWLAISAAVFGTESSDREP 473
           DR        + A    P   L      + + SD P+AP +P L ++      E+   + 
Sbjct: 444 DRYAENGLGFDRAARIAPLGGLASRNVPVALHSDFPMAPAEP-LFLAWTAMSRETLSGKV 502

Query: 474 FQPEQCLDVRTSLAASTA-----MGRDH----LAVGDPADVVLLDTDPYFV 515
           F P + L +  ++ A T      +G ++    +  G  AD  +LD DPY V
Sbjct: 503 FSPSERLTLDQAIRAITIDAAYMIGMENEVGSIEAGKLADFAVLDKDPYEV 553