Pairwise Alignments

Query, 751 a.a., GGDEF domain-containing protein from Bifidobacterium breve UCC2003

Subject, 721 a.a., diguanylate cyclase from Herbaspirillum seropedicae SmR1

 Score =  165 bits (417), Expect = 9e-45
 Identities = 89/250 (35%), Positives = 144/250 (57%), Gaps = 2/250 (0%)

Query: 21  DIDHALENGEFGCYLQPKCNAETGTIVGAEALVRWNHPKYGVIPPGWFVPVLERAGRICH 80
           ++  AL+  EF  Y QPK + + G ++GAEAL+RW  P+ G++PP  F+P  E AG I  
Sbjct: 465 NLRRALDQDEFKLYYQPKLSLQDGRLIGAEALIRWESPQQGMVPPDRFIPFAEEAGLIVP 524

Query: 81  VDVFVWRFVAEMLGRWEREGRNLVPVSVNVSMMDINQMDVADVIGGLLNEYNIDARLLQV 140
           +  +V R        W++ G   +PV+VN+S   +NQ  + D + G+L +  + A  L++
Sbjct: 525 IGEWVLRTACRQNQAWQQAGLPPIPVAVNLSPRQLNQ-SLPDFVAGVLAQSGLAASWLEL 583

Query: 141 EITESAVAKNLPVVKDTIRKLHARGIVVLMDDFGSAYSSLNMLKDINVDVIKLDTKFIEL 200
           EITE+ V K+      T+  L   G+ + +DDFG+ YSSL+ L+   VD +K+D  F+  
Sbjct: 584 EITENVVMKDAEKSVATLHALKRLGLQISVDDFGTGYSSLSYLRRFPVDALKIDKSFVRD 643

Query: 201 SDENAGKGMKIIQSMIVMAKKLHLMIIAEGAQTKEQVDWLKAIGCGYIQGYYFYPPLPVK 260
              +A     I++++I +A  L+L +IAEG + +EQ  +LK   C  +QGYYF  P+ V 
Sbjct: 644 IVRDADSA-AIVKAIISLAHILNLRVIAEGVEDEEQHAFLKENACDEVQGYYFGKPMEVA 702

Query: 261 RMETLLAERA 270
                ++E+A
Sbjct: 703 VFTAWMSEQA 712



 Score = 65.5 bits (158), Expect = 9e-15
 Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 15/152 (9%)

Query: 439 DSLTGLLNRNAYDDDLEYIQATHDQP---LTVVYVDMIGLHEINNHLGHAKGDSALCELA 495
           D+LTGL NRN   + L+       Q      V +VD+     IN+ LGH  GD  L  +A
Sbjct: 289 DALTGLPNRNMLHEHLQRALRVARQKGALTAVAFVDLDQFKFINDSLGHQVGDELLKTVA 348

Query: 496 DAMRACF-DDDRIYRVGGDEFVIVSCNHT-----VSQSMRR-MARMRRDFLEGDWDI--- 545
             ++AC  + D + R GGDEFV+V  N T     +++ M+R +A + R +  GD +    
Sbjct: 349 QRLQACLREADMVARQGGDEFVLVLQNQTEGEAGIAEVMQRILAAVARPWQAGDREFQVT 408

Query: 546 -SVGMAE-SDDGGDLPDLINQAEIRMREDKKQ 575
            S+G++    DG D+  L+  A+  M   K+Q
Sbjct: 409 ASIGVSRYPADGKDVESLLKHADSAMYRAKEQ 440