Pairwise Alignments

Query, 751 a.a., GGDEF domain-containing protein from Bifidobacterium breve UCC2003

Subject, 588 a.a., phosphodiesterase from Herbaspirillum seropedicae SmR1

 Score =  157 bits (398), Expect = 1e-42
 Identities = 84/241 (34%), Positives = 137/241 (56%), Gaps = 4/241 (1%)

Query: 30  EFGCYLQPKCNAETGTIVGAEALVRWNHPKYGVIPPGWFVPVLERAGRICHVDVFVWRFV 89
           E   + QPK     G  VG EAL+RW+HP +G IPP  F+P+ E+ G+I  V  +V R V
Sbjct: 350 ELVLHFQPKVRLRDGACVGVEALIRWHHPIHGNIPPDVFIPLAEKTGQIRQVTAWVLRQV 409

Query: 90  AEMLGRWEREGRNLVPVSVNVSMMDINQMDVADVIGGLLNEYNIDARLLQVEITESAVAK 149
              + RW + GR L PV+ N S  D +  ++ +++   L  + +   L+++E TE A+A 
Sbjct: 410 VAQVARWLKSGRAL-PVAFNASARDFDSDELRELLAQQLKLHKVPPALIEIEFTEHAMAN 468

Query: 150 NLPVVKDTIRKLHARGIVVLMDDFGSAYSSLNMLKDINVDVIKLDTKFI-ELSDENAGKG 208
           +   V+  ++ L   G+ V +DDFG+ +S+L+ LK+I  D +K+D  FI  L D+ A + 
Sbjct: 469 HPQQVRQRVQALRELGVKVAIDDFGAGFSNLSYLKNIPADTMKIDRSFIHRLLDDEADQ- 527

Query: 209 MKIIQSMIVMAKKLHLMIIAEGAQTKEQVDWLKAIGCGYIQGYYFYPPLPVKRMETLLAE 268
             I+ S++ +A  L   ++AEG +++     L+ +GC Y QGY    P+P+  +E  L  
Sbjct: 528 -LIVPSILHLAHNLGFSVVAEGLESERTATLLRHLGCDYGQGYAIARPMPLAELEAWLER 586

Query: 269 R 269
           R
Sbjct: 587 R 587