Pairwise Alignments

Query, 337 a.a., LacI family DNA-binding transcriptional regulator from Bifidobacterium breve UCC2003

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score = 94.4 bits (233), Expect = 4e-24
 Identities = 88/344 (25%), Positives = 149/344 (43%), Gaps = 23/344 (6%)

Query: 1   MVTIREIAQRAGFSPATVSRLLNGDPTLSVKEETRRKILQVCEELGYETQD--RRLVAPH 58
           M T++++AQ AG S ATVSR L     +S    TR+++ +   E GY      R L    
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVS--SSTRKRVEEAVLEAGYSPNSLARNLRRNE 58

Query: 59  DIAVLDAIPSDEELSNAYYSELRSTLLSTAQQM-HITLSFYTDINKLIDNS-------TQ 110
              ++  +P   ++ + Y+SE+   +   A +  ++ L   +   K  +NS        Q
Sbjct: 59  SKTIVAIVP---DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQ 115

Query: 111 YDGFVSIGPELHSYESLERLHEVLPHGVFIDVNPAPNLFSSVQPDLPQTILDALSEARAR 170
            DG + +G +L    S      + P  +  +  P   L  +V  D   +  +A++     
Sbjct: 116 ADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELEL-PTVHIDNLTSAFEAVNYLTQL 174

Query: 171 GMTRIGFIGGEGRMMGTYEYPEDIRTMAYRDWCERLGLETAGLIFTGGQVSVKTGRKHGE 230
           G  RI  I G              R   Y+    R G+       T G  + + G K   
Sbjct: 175 GHKRIAQISGPQHAALC-----QFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVR 229

Query: 231 TIVAKLSSNMPDCFIVATDSLAVGVIQAFTKAGILVPRDVSIISINNQSIAQYISPPLTT 290
            ++A      P       D++A+G IQ   + G+ VP+D+S++  ++   AQY  PPLTT
Sbjct: 230 QLLAL--PEQPTAIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTT 287

Query: 291 YAIDQTALARNALLMLSQSISFNDDITCHTMISTKLVARESFVP 334
            +  +  + R A+LM+ + +  +D      ++ TKLV RES  P
Sbjct: 288 ISQPRYEIGRQAMLMMLELLRGHDVRAGSRLLETKLVVRESAAP 331