Pairwise Alignments

Query, 374 a.a., DNA polymerase III subunit beta from Bifidobacterium breve UCC2003

Subject, 373 a.a., DNA polymerase III subunit beta from Phaeobacter inhibens DSM 17395

 Score =  102 bits (254), Expect = 2e-26
 Identities = 100/382 (26%), Positives = 164/382 (42%), Gaps = 21/382 (5%)

Query: 1   MKVEIDTAALADAVAWTSRVIDARPSNPILAGVKLEAIDGTLQFSAFNYEISARHHIEAG 60
           MK+ I+   L  AVA    V++ R + PILA V +EA    +QF A + +I       A 
Sbjct: 1   MKISIERGTLLKAVAQAQSVVERRNTIPILANVLIEAEGDIVQFRATDLDIEVVDKAPAQ 60

Query: 61  VDEVGSALVLGKLLADITKSL-RSEKTYLTTDGST--LTITSGKSKFTLQLMPDAEYPDL 117
           V+  G+  V    L +I + L       LT D ++  LT+ +G+S F+L  +P  ++P +
Sbjct: 61  VERAGATTVAATTLHEIVRKLPDGALVTLTADAASGRLTVEAGRSNFSLATLPREDFPVM 120

Query: 118 PVVPPMLG-QVDAQTFVQAVNQASVAVSREENRPVLTGVRMQFQD-----DKVIMTSTDR 171
                      +A    +  +++  A+S EE R  L GV M   D       +   +TD 
Sbjct: 121 ASSEYHSNFSANAAVLQRLFDKSKFAISTEETRYYLNGVYMHVADGVEGGKALRCVATDG 180

Query: 172 FRLARAAFTWTPQDANVDTITLVRGSLLKDVARSLDEHQNIRLDFDAD-NPTLLGFENAG 230
            RLAR      P  A      +V    + ++ + LD+ +   +D     + T + F    
Sbjct: 181 HRLARIDAN-LPMGAEDMPGVIVPRKTVGELRKLLDDDE---MDIAVSVSETKVRFATPN 236

Query: 231 RVSTSQLIDGEFPAVDRLFADEYPIQAVVNKQDLLDAISRVALV-AERNAPIRMMFTGQE 289
              TS++IDG FP   R+       +  V+  +   A+ RVA V +ER+  +++      
Sbjct: 237 ITLTSKVIDGTFPDYTRVIPAGNTRRLEVDASEFARAVDRVATVSSERSRAVKLQLDEDR 296

Query: 290 LALSAGSADEAQANETLDIDMDGDEITVAFNPSYLKEGLSAIAEPFVRIKMTTPVKPVEF 349
           L LS  + D   A E L +    + + + FN  YL E  + +          +   P   
Sbjct: 297 LILSVNAPDSGAAEEELAVAYRDERLEIGFNAKYLLEIANQVDRENAVFMFNSSGDPT-- 354

Query: 350 NGQQEADSDESMDYRYLLVPMR 371
                  SDES    Y+++PMR
Sbjct: 355 --LMREGSDESA--VYVVMPMR 372