Pairwise Alignments

Query, 469 a.a., multidrug transporter from Burkholderia phytofirmans PsJN

Subject, 468 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  427 bits (1097), Expect = e-124
 Identities = 229/472 (48%), Positives = 325/472 (68%), Gaps = 24/472 (5%)

Query: 6   AVLAGCT-LDPHYERPAAPVAVAYPQGDAYESTSTAAATVAKSASATVVVPPLAVDTAWR 64
           A+LAGC  L P Y+RP APV+  +  G A +  ++ +               +  D  W+
Sbjct: 12  ALLAGCVNLAPDYQRPEAPVSSQWLPGTAGQPAASGS---------------VPTDIEWQ 56

Query: 65  SFFRDERLQRLIEIALANNRDLRVAALNVAEYEAQYRITRAALAPSISASGSLTRERTQG 124
           +FF D RL RL  +AL NNRDLR+A+LNV + +AQYRI RAA  P+I ASGS T  RT  
Sbjct: 57  NFFIDNRLVRLQTLALVNNRDLRLASLNVEKAQAQYRIERAASLPTIDASGSGTHTRTPS 116

Query: 125 VTS-----SVS---DLNVGTTSWEIDFFGRLRSLKRQALENYLATDASRQSTQISLIATV 176
            TS     S+S      +G +S+E+D FGR+++L+ +ALE+YLA   +R+STQISLIA V
Sbjct: 117 STSMTGKPSISHEYSAQLGLSSYELDVFGRIQNLQDEALEDYLALTETRRSTQISLIAEV 176

Query: 177 ATDYLTLLSDERLLQLTEDTVKADQSTYDVTKRVQELGNSSLLDVQQAENSLASAKASLA 236
           AT +LTL +D +LL+L EDT+ + Q +YD+T+    LG SS L+V QA+ ++ SA+  +A
Sbjct: 177 ATGWLTLAADNQLLKLAEDTLASQQKSYDLTRSSHALGGSSGLEVAQAQTTVESARGDVA 236

Query: 237 SYRRAVAQDRNNLIAILGAPIPDDLPPARSFDDESMFADIGAGVPSLLLTRRPDIVQAEH 296
            Y+  + QDRN L  ++G+ +P++L P       +    +  G+PS LL RRPD++ AEH
Sbjct: 237 QYKSQILQDRNALRLLVGSDLPEELLPNADTQSVAQLVQVPDGLPSSLLQRRPDVLSAEH 296

Query: 297 ALKAANANIGAARAAFFPKIELTATAGTSSSTLSSLFKAGTGAWAFAPSVSVPIFDYGSN 356
            LKAAN +IGAARAAFFP I LTA+AG+SS++LS LFK+GTGAW+FAPS+SVPIFD G+N
Sbjct: 297 TLKAANIDIGAARAAFFPSITLTASAGSSSTSLSGLFKSGTGAWSFAPSISVPIFDGGAN 356

Query: 357 KASLDVAKIEKQIEVADYESTIQTAFKEVSNALTARATYVDQVLADREYVASSQRYYTLA 416
           +A+LD AK+E QI++  Y+ TIQTAFKEV++AL  R+T  +++ A + Y  +S+R Y LA
Sbjct: 357 RATLDSAKVENQIQIQTYQQTIQTAFKEVADALAVRSTLDERLAAQQAYTDASRRSYELA 416

Query: 417 EARYKAGTDSFLTFLDAQRTLYTAQQQLATDTLSRQANLVTLYKVLSGGWEQ 468
           +A Y+ G+ S+L  L++QR+LY+A+Q L +  L+ Q+N VTLYKV+ GGW +
Sbjct: 417 DALYRGGSQSYLEALESQRSLYSAEQDLISLRLTEQSNRVTLYKVMGGGWNR 468