Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  273 bits (699), Expect = 9e-78
 Identities = 183/539 (33%), Positives = 267/539 (49%), Gaps = 44/539 (8%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPVT  E  FP+   L+S TD  G I YCN AF+ +SG++++ELI  PHNL+RHPD
Sbjct: 1   MRNNQPVTQRERTFPAQQRLISTTDAKGVITYCNDAFVDISGYSKEELIRSPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           +P   FA +W T++ G PW  +VKNR KNGDHYWV+A VTPV E   VVGY SVRVKP  
Sbjct: 61  VPSAVFAHMWGTLKQGLPWMGIVKNRSKNGDHYWVNAYVTPVFEGNQVVGYESVRVKPSA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRL---QALMRLPVATRAALGYAITP 177
             +  AEALY R+  G+S      + V +    L  +   Q    +     ++ G+A+  
Sbjct: 121 EQIARAEALYQRINQGKSAVPGSDKWVPMLQDWLPFILVSQLSFVVGAFLDSSWGFALAA 180

Query: 178 LALLLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDL 237
           +  +  GL   Q       W   G+   + +A        +A    D  G   RL    L
Sbjct: 181 VLSVPLGLMGLQ-------WQQRGIKRLLRLAEQTTSDPLIARMYTDSRGVQARLEMSIL 233

Query: 238 TADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTEL 297
           + + ++            L +L+ + A  + D   Q   +  N+   SSG       TE 
Sbjct: 234 SQEARLK---------TCLTRLQ-DTAEHLNDQARQSNTLAHNS---SSGLERQRVETEQ 280

Query: 298 QAASLEETAATMEELTTTVQANADA-------TVRALDLAREAQAAAAVGGKIAGQVEQT 350
            A ++ + AAT +E+ + VQ  ADA       T R  D+A E + A      + G+  QT
Sbjct: 281 VATAVNQMAATTQEVASHVQRTADATQEANRLTSRGRDIAGETREAIERLSVVVGETGQT 340

Query: 351 MAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRC 410
           +  +   S  I  +  VI GIA QTN+LALNAA+EAARAGE GR FAVVA EVR LAQR 
Sbjct: 341 VTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT 400

Query: 411 AASSKEIKSVV--------------EASASEVAAGTELVARTTSQMRVIDEAVGRVSSII 456
           + S+ +I +++              +A   +   G   V      +  I EAV  ++ + 
Sbjct: 401 SESTGQIHALIAKLQQTATNAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMT 460

Query: 457 VDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
             +A A+ EQ+    ++++ +S++     Q +     +A  ++ L   A+     V  F
Sbjct: 461 TQIAAATEEQSSVAEEISRNISNISELADQTSGQAHSSALLSEELTRTANTQYSLVERF 519