Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 529 a.a., HAMP domain-containing protein from Ralstonia solanacearum GMI1000

 Score =  422 bits (1085), Expect = e-122
 Identities = 243/529 (45%), Positives = 335/529 (63%), Gaps = 16/529 (3%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNN PVT  E     +  L+S TD  GRI + NPAF+ +SGFT  ELIG PHN++RHPD
Sbjct: 1   MRNNLPVTDAETTLAPADYLISRTDPAGRIVFANPAFVRISGFTEAELIGAPHNVVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP  AFADLWAT+R G+ W  LVKNRRK+G  YWV ANVTPV++ GA+ GY SVR     
Sbjct: 61  MPEAAFADLWATLRSGQSWRGLVKNRRKDGGFYWVQANVTPVLQDGAIAGYTSVRSMATP 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGV-----LGRLQALMRLPVATRAALGYAI 175
             +  A  +YA +R+G++    +R G ++RTG      L R+ +L    +  ++ +  AI
Sbjct: 121 AQIARAGRVYAAIRAGDA-SYAVRSGRILRTGWRRLFNLFRIDSLRLRVIGLQSLIAVAI 179

Query: 176 ---TPLALLLTGLAAWQGAPPAPF-----WI-GFGVATAVSIASCLMLTRQLAAPVRDMS 226
              T  A L    A  +G P         W+ G G A   +++  L+L R L  P+   +
Sbjct: 180 LIGTLWAHLALEAADLRGMPWLVLSRDWLWLTGVGCAGLATLSG-LLLARTLIRPLEQAA 238

Query: 227 GFATRLAAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISS 286
             ATRLAAGDLT+ L+   +D++GDV++A+  ++A+L +IV D++     +  +  +IS+
Sbjct: 239 ALATRLAAGDLTSTLEARGNDEIGDVVRAMGTMRASLWSIVRDIQDGAANVAHSTLQISA 298

Query: 287 GNVDLARRTELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQ 346
           GN DL+ RTE QAA+L+ETA++ME+LT+ V  NAD    A  LA +A + A  GG+I  +
Sbjct: 299 GNHDLSARTEQQAAALQETASSMEQLTSMVARNADHAREASVLAEQASSVATDGGRIVQR 358

Query: 347 VEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRML 406
           V  TM  I  +SR + DI   I+ IAFQTNILALNAAVEAARAGE GR FAVVAGEVR L
Sbjct: 359 VVDTMGAIRGSSRHVTDIIATIESIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSL 418

Query: 407 AQRCAASSKEIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQ 466
           AQR A ++ + K++++AS   V  G  LV +  + M+ I  +V  V+ +I +++ +S EQ
Sbjct: 419 AQRSAQAAAQTKAIIQASDQSVRDGEALVQQAGATMQQIVASVQTVTQLISEISASSREQ 478

Query: 467 AEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
           + GI Q+N +VS LDG TQQNA LVE+AAA A  LA Q++ L  AV +F
Sbjct: 479 SSGIAQINTSVSQLDGVTQQNATLVEKAAAAASVLAGQSEALKRAVAVF 527