Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 648 a.a., HAMP domain-containing protein from Rahnella sp. WP5

 Score =  283 bits (723), Expect = 2e-80
 Identities = 158/327 (48%), Positives = 219/327 (66%), Gaps = 5/327 (1%)

Query: 202 VATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTADLQIARHDDLGDVLQALNQLKA 261
           +   V I     +TRQ+A P+RD    A  +A GDLT      R D+LG ++ A++ +  
Sbjct: 297 IVMLVGIIIAWRITRQIAQPLRDTLKTAEAIARGDLTVAHPTTRRDELGMLMNAVSAMSQ 356

Query: 262 NLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAASLEETAATMEELTTTVQANAD 321
           NL+ ++Y++R+ ++ +   A EI++GN DL+ RTE QAA++EETAA+MEEL+ TV+ NAD
Sbjct: 357 NLSTMIYEIRSGVSQVSHAAAEIAAGNTDLSSRTEQQAAAVEETAASMEELSATVKQNAD 416

Query: 322 ATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRRIADITGVIDGIAFQTNILALN 381
               A  LA EA   A +GGK  G+V  TM  I+ +S+RIA+IT VI+ IAFQTNILALN
Sbjct: 417 NAHHASKLASEASGTATLGGKQVGEVVDTMQQISGSSKRIAEITSVINSIAFQTNILALN 476

Query: 382 AAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSVVEASASEVAAGTELVARTTSQ 441
           AAVEAARAGE GR F+VVA EVR+LAQR A ++KEI+ ++  S   V  G +LV  T   
Sbjct: 477 AAVEAARAGEQGRGFSVVASEVRILAQRSAQAAKEIEGLIAESVERVNTGAKLVENTGRT 536

Query: 442 MRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRL 501
           M+ I ++V  V  I+ ++A+AS EQ+ GI Q++QA+  +D  TQQNAALVEQ++A A  L
Sbjct: 537 MQDIVKSVSHVRDIMGEIASASDEQSRGISQISQAIVEMDSTTQQNAALVEQSSAAADSL 596

Query: 502 AEQADVLDEAVRLFTVAD-----AAPA 523
            +QA  L +AV +F +AD     AAPA
Sbjct: 597 EDQAATLTQAVSVFRLADNGDMLAAPA 623