Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 554 a.a., HAMP domain-containing protein from Rahnella sp. WP5

 Score =  285 bits (729), Expect = 3e-81
 Identities = 164/359 (45%), Positives = 233/359 (64%), Gaps = 15/359 (4%)

Query: 203 ATAVSIASCL--MLTRQLAAPVRDMSGFATRLAAGDLTADLQIARHDDLGDVLQALNQLK 260
           A A+ +A+ L   LTR +  P+      A  +AAGDLT  +Q+   D+ G ++Q L  + 
Sbjct: 200 ALAILMAAALGYFLTRSITRPLHTAVKVAENVAAGDLTTQIQVMSQDETGQLMQGLKNMN 259

Query: 261 ANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAASLEETAATMEELTTTVQANA 320
            NL  IV +VRA    +   + EI++GN+DL+ RTE QA+SLEETA+ ME++T TV+ NA
Sbjct: 260 ENLLKIVTEVRAGTNAITSASSEIAAGNLDLSSRTEQQASSLEETASAMEQMTATVKQNA 319

Query: 321 DATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRRIADITGVIDGIAFQTNILAL 380
           D   +A  LA +A   A  GG++ G+V  TM GI  +SR+I DI  VIDGIAFQTNILAL
Sbjct: 320 DNARQANLLAAQASRVAVQGGEVVGEVVNTMEGINTSSRKIVDIIAVIDGIAFQTNILAL 379

Query: 381 NAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSVVEASASEVAAGTELVARTTS 440
           NAAVEAARAGE GR FAVVA EVR LAQR A+++KEIK +++ S ++V  GT+LVA+  +
Sbjct: 380 NAAVEAARAGEQGRGFAVVASEVRNLAQRSASAAKEIKVLIDDSVAKVDNGTQLVAKAGA 439

Query: 441 QMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQR 500
            M  +  +V  V+ I+ ++A AS+EQ+ GI ++N+A++ +D  TQQNAALV++A++ A  
Sbjct: 440 TMAEVVSSVKNVTDIVGEIAIASNEQSTGIEEINKAITQMDEVTQQNAALVQEASSAAYS 499

Query: 501 LAEQADVLDEAVRLFTVA--DAAPAQRVAGTKREVFTVDAARMPAPGIKRHRAPVIADD 557
           L EQA+ L +A+ +F V+   A  A R AG  +           +P +  +R PV A D
Sbjct: 500 LNEQAERLSQAISIFKVSAGSATAAVRKAGQTK-----------SPALLSNRQPVPAAD 547