Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 521 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Pseudomonas sp. BP01

 Score =  273 bits (697), Expect = 2e-77
 Identities = 189/546 (34%), Positives = 271/546 (49%), Gaps = 58/546 (10%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N PVT HE  F S   L+S TDL  RI YCN AF+++SGFT DEL+GQPHNL+RHPD
Sbjct: 1   MRMNLPVTEHERTFSSDQRLISTTDLNSRITYCNEAFVSISGFTYDELVGQPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP   F  +W TI+ G+PW  +VKNR KNGD+YWV A VT + E+G + GY SVR  P R
Sbjct: 61  MPPSVFGHMWETIKQGKPWMGVVKNRAKNGDYYWVSAYVTAIYEQGRISGYESVRSVPTR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAIT-PLA 179
             +R AEALYAR+R+                          R  V   A LG+ +     
Sbjct: 121 EQIRRAEALYARLRAD-------------------------RAAVPWAARLGHGLAHGWP 155

Query: 180 LLLTGLAAWQGAPPAPFWIGFGVATA-VSIASCLMLTRQLAAPVRDMS----GFATRLAA 234
           L+  GL +  G    P +   GV  A + +A  L+  RQ  A  R ++     F + L A
Sbjct: 156 LIGAGLLSAAGYLWLPAYAALGVLMASLLLAWYLVEHRQNQAIRRTLAEHPKAFTSPLVA 215

Query: 235 GDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARR 294
              + +  +    DL  ++    +L+  L  +V D    +      + ++S     +  R
Sbjct: 216 LTYSDNPGLQGQLDLA-IISEEARLQTALTRLV-DAGVGVKSRAAQSSDLSDAQAQMLDR 273

Query: 295 ----TELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAG----- 345
               T+  A ++ + AAT++++T  VQ+ A A   A  LA+     A    K  G     
Sbjct: 274 QRSETDQSATAIAQMAATIQQVTHNVQSTAHAAGDADQLAQHGSELALQSLKAMGSMSDA 333

Query: 346 --QVEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEV 403
              + Q +  +   ++ I  +  VI  IA QTN+LALNAA+EAARAGE GR FAVVA EV
Sbjct: 334 VNDIGQAVNALAEQTQSIGSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 393

Query: 404 RMLAQRCAASSKEIKSVV-------EASASEVAAGTEL-------VARTTSQMRVIDEAV 449
           R LAQR  AS++EI  ++       E + S  + G ++       V    + +  I +AV
Sbjct: 394 RSLAQRTRASTEEIHHIIASLRAGAERAVSTASRGEQMSRDSVHSVEAVQAALSGIAQAV 453

Query: 450 GRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLD 509
            R++ +   +A AS +Q+     +NQ +  +     Q+A    Q A  +Q L   A+ L 
Sbjct: 454 SRITGMSQQMATASEQQSHVAEDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLH 513

Query: 510 EAVRLF 515
                F
Sbjct: 514 SLAERF 519