Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 542 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  297 bits (760), Expect = 8e-85
 Identities = 193/555 (34%), Positives = 290/555 (52%), Gaps = 59/555 (10%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           M+NN PVT  E  F     +VS TDL G I Y N  F+ +SGFTRDELIG+ HNL+RHPD
Sbjct: 1   MKNNLPVTQVEVPFIKGKYIVSKTDLKGIITYANDTFVELSGFTRDELIGKNHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP  AFADLW ++++GRPW  +VKNR KNGDHYWV A V PV +KG  +GY+SVR +P R
Sbjct: 61  MPPAAFADLWISVKEGRPWRGIVKNRCKNGDHYWVDALVVPVRQKGQTIGYMSVRTEPSR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             V++AEALYA++  G         G + R G   ++    ++   T   +       A 
Sbjct: 121 AQVQSAEALYAKLGKG--------GGAIPRPGGWRKVSLRKKMAGLTLFVMA------AQ 166

Query: 181 LLTGLAAWQGAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVR------------DMSGF 228
           LLTG+  W G+      IGF   + V++   L LT  +A  V+              +  
Sbjct: 167 LLTGIGVWFGS-----GIGFSADSIVALVQILSLTGLVAGAVQIGLQQGIFRAIDATNSS 221

Query: 229 ATRLAAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGN 288
             R+A GDL+ DL   R D++G +  +L   +A+L  ++ ++      +  N  +++   
Sbjct: 222 LDRVAQGDLSEDLWHDRLDEVGKLQDSLLTTQAHLKVMLAEIAEAANRVSGNTTQLNLEM 281

Query: 289 VDLARRTELQAASLEETAATMEELTTTVQ---ANADATVRALDLAREAQAAA---AVGGK 342
             ++ ++E Q+ S+   AA+MEE++ TV+   A+A  T  A+   RE  A      + G+
Sbjct: 282 SSVSSQSESQSDSVSRIAASMEEMSATVEQVSADAQETASAVGTTRERIAGVEQRMIQGR 341

Query: 343 IAGQ--------VEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGR 394
            A +           TMA +  +  RI  +T  I  IA QTN++ALNAA+EAARAGEAGR
Sbjct: 342 EASRAVVSAVDTASNTMATLFQSLNRIGVVTQGIQEIADQTNLIALNAAIEAARAGEAGR 401

Query: 395 SFAVVAGEVRMLAQRCAASSKEIKSVV--------------EASASEVAAGTELVARTTS 440
            FAVVA EVR LA+R    + EI  +V              E++ ++V    E +  T  
Sbjct: 402 GFAVVADEVRKLAERTRLQTAEIAEMVTEIQKITESAVGSIESAGAQVGHNDEAMGETGV 461

Query: 441 QMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQR 500
            +  + +    +  +   +A A+ +Q++  + V  +VS +    ++NAA + +A    Q+
Sbjct: 462 SLAEVVQDGQHIDEMARHIAQATVQQSQASQDVAMSVSEIAALIEENAAAIGEAERNVQQ 521

Query: 501 LAEQADVLDEAVRLF 515
           L   A  L   +  F
Sbjct: 522 LLATAGELRNLIAYF 536