Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 514 a.a., PAS domain-containing protein from Pantoea sp. MT58

 Score =  412 bits (1059), Expect = e-119
 Identities = 238/517 (46%), Positives = 313/517 (60%), Gaps = 6/517 (1%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MRNNQPV+  EY F     L+S TDL   I Y N AFI  SGFT DE+ GQPHN++RHPD
Sbjct: 1   MRNNQPVSQREYLFDDHATLMSTTDLNSHITYANDAFIEASGFTADEINGQPHNMVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP EAFAD+WAT++ G PWTALVKNRRKNGDHYWV AN  PVV  G V GY+SVR KP  
Sbjct: 61  MPPEAFADMWATLKQGEPWTALVKNRRKNGDHYWVRANAIPVVRDGKVQGYMSVRTKPTA 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             VR  E LY   R G +RG +  +G++VR+G       L  LP+  R       T +AL
Sbjct: 121 EEVRQTEVLYQDFREGRARGRRFHKGLLVRSGWRRPASILKTLPLRWRIRS----TLMAL 176

Query: 181 LLTGLAA-WQGAPPAPFWIGFGVATAVSIASC-LMLTRQLAAPVRDMSGFATRLAAGDLT 238
           L   +A  W          GF    A  +  C + L +Q++ P+  M   A R+A G   
Sbjct: 177 LPLSVAGVWALGMTHTALAGFAAGMAGLLLLCSVWLEQQISRPIERMCKQALRVATGASH 236

Query: 239 ADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQ 298
              Q+ R D++G  L+A+ QL      +V DV  Q   +L  +  I+  N +L+RRTE  
Sbjct: 237 QVEQMDRVDEVGVTLRAIGQLGLMFRWLVDDVSGQAINVLSASDAIARSNNELSRRTEQA 296

Query: 299 AASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAAS 358
           AA++++TAATM E+T TV++N +    A  L+     AA+ GG +   +   M  I  +S
Sbjct: 297 AANVQQTAATMNEMTATVKSNTETAHEANSLSASTSHAASKGGDVMTDMMGMMGEIADSS 356

Query: 359 RRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIK 418
            RIA+IT VIDGIAFQTNILALNAAVEAARAGE G+ FAVVAGEVR LAQR A ++ EIK
Sbjct: 357 TRIANITSVIDGIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRSLAQRSAKAASEIK 416

Query: 419 SVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVS 478
            +VE S+S V +G E  +     M+ I   V  V+++I  ++ A++EQA  + +V+ AV 
Sbjct: 417 MLVETSSSRVKSGNEHASAAGRTMQDIVSQVQNVTALIAQISAATAEQATALSEVSSAVE 476

Query: 479 HLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
            LD  T QNAA V ++A  + R+  QA+ L EA+ +F
Sbjct: 477 DLDDITHQNAARVTESAEASGRMTHQANRLVEAISVF 513