Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 544 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  273 bits (699), Expect = 1e-77
 Identities = 150/310 (48%), Positives = 214/310 (69%)

Query: 212 LMLTRQLAAPVRDMSGFATRLAAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVR 271
           L++ R++A  + +    A  +A GDLT ++  +  D++G ++ A+ ++  NL  IV  VR
Sbjct: 205 LLIARKIARSLAEAVELAETIAEGDLTREIDTSSTDEIGHLMAAMAKMNRNLVTIVATVR 264

Query: 272 AQITGMLDNAREISSGNVDLARRTELQAASLEETAATMEELTTTVQANADATVRALDLAR 331
             +  +   + +I++GN+DL+ RTE QA+SLE+TAA  EELT+TV+ NA+  ++A  LA 
Sbjct: 265 TGVNTVAAASSQIATGNMDLSARTEQQASSLEQTAAATEELTSTVKQNAENALQADQLAS 324

Query: 332 EAQAAAAVGGKIAGQVEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGE 391
            A   AA GG++  QV  TM  I ++S  IADI  VIDGIAFQTNILALNAAVEAARAGE
Sbjct: 325 AASGIAAEGGEVVKQVVTTMEEIRSSSLNIADIISVIDGIAFQTNILALNAAVEAARAGE 384

Query: 392 AGRSFAVVAGEVRMLAQRCAASSKEIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGR 451
            GR FAVVA EVR LAQR A+++KEIK +++ S S+V  G++LV    + M+ + E+V R
Sbjct: 385 QGRGFAVVATEVRSLAQRSASAAKEIKQLIDDSVSKVENGSQLVMSAGNTMQQVVESVRR 444

Query: 452 VSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEA 511
           V+ ++ +++ AS EQ+ GI QVNQA+SH+D +TQ+NAALVE+A A AQ L EQA  L+ A
Sbjct: 445 VTDVVTEISAASREQSLGIEQVNQAISHMDQSTQENAALVEEATAAAQSLQEQARQLERA 504

Query: 512 VRLFTVADAA 521
           V +F +   A
Sbjct: 505 VNVFKLRQEA 514