Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 512 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  415 bits (1066), Expect = e-120
 Identities = 232/504 (46%), Positives = 325/504 (64%), Gaps = 5/504 (0%)

Query: 12  YEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPDMPREAFADLWA 71
           Y +P+   L+S+TD +  + Y N +F+ VSGF R++LIGQPHN++RHPDMPREAFAD+WA
Sbjct: 11  YPYPAQATLMSSTDTSSVLTYANSSFVEVSGFHREQLIGQPHNIVRHPDMPREAFADMWA 70

Query: 72  TIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPERTAVRAAEALYA 131
           T+R G  WTA+VKNRR +G HYWV ANVTP+   G + G+LSVR +P    +RAA ALY 
Sbjct: 71  TLRRGDAWTAVVKNRRADGRHYWVRANVTPIRRGGGITGFLSVRTQPAPHEIRAAAALYR 130

Query: 132 RMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLALLLTGLAAWQGA 191
           R R G +RG++   G+VVR+G+LG  +    LPV  R  L  A   L  L  G+ A  GA
Sbjct: 131 RFREGRARGLRFCHGLVVRSGLLGWTRLEQVLPVRWRLRLALAAGGLTALAGGILA--GA 188

Query: 192 PPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTADLQIARHDDLGD 251
           P AP  +   V   +++A CL L R+LAAP+  +   A  +A G       + R D++G 
Sbjct: 189 PLAP--MAASVLPPLALA-CLWLERRLAAPLELVLQQAKAVACGQPAQTQGLDRIDEIGL 245

Query: 252 VLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAASLEETAATMEE 311
           +L+A+NQ   NL A++ DV AQ+ G+   +R+I+S N DL +RT    A L++TA+  E+
Sbjct: 246 LLRAVNQSGLNLRALIDDVAAQVQGLEQASRQIASDNADLRQRTADTHAQLQQTASAAEQ 305

Query: 312 LTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRRIADITGVIDGI 371
           + T V+ +AD+   A   AR+   AAA G  I  QV QTM  I  AS RI +I G+ID I
Sbjct: 306 MATAVRHSADSAQAAHAQARQTSQAAAQGRDIVTQVVQTMHQIADASGRIGEINGLIDSI 365

Query: 372 AFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSVVEASASEVAAG 431
           AFQTNILALNAAVEAARAGEAGR FAVVA EVR LAQR A++++EIK+++  S  +  AG
Sbjct: 366 AFQTNILALNAAVEAARAGEAGRGFAVVAAEVRTLAQRSASAAREIKALIAHSVGQSQAG 425

Query: 432 TELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALV 491
            +   +  + +  I      +S++I  ++ ++ EQ++G+ QV+Q+   LDG TQQNAA+V
Sbjct: 426 AQRAEQAAAAIESIVAQAQDMSTLIGAISTSAVEQSQGVSQVSQSALMLDGMTQQNAAMV 485

Query: 492 EQAAATAQRLAEQADVLDEAVRLF 515
           E +AA    + ++   L +AV +F
Sbjct: 486 EHSAAAVAAMQQRMQTLQQAVAVF 509