Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 573 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  277 bits (708), Expect = 9e-79
 Identities = 163/366 (44%), Positives = 232/366 (63%), Gaps = 6/366 (1%)

Query: 200 FGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAGDLTADLQIARHDDLGDVLQALNQL 259
           FG+A  + I+    LTRQL    RD++  A  +A+GDL+  + I+ H   G V+ A++ +
Sbjct: 206 FGIALGLFISR--NLTRQLGGEPRDVAAAADAIASGDLSTHIDIS-HAAQGSVVSAMHMM 262

Query: 260 KANLAAIVYDVRAQITGMLDNAREISSGNVDLARRTELQAASLEETAATMEELTTTVQAN 319
           + +L  +V  VR     +   +R+I++GN+DL+ RTE QA++LEETA++MEELT+TV+ N
Sbjct: 263 QGSLRKVVQTVRTSSESIATGSRQIATGNLDLSARTEQQASALEETASSMEELTSTVKHN 322

Query: 320 ADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGITAASRRIADITGVIDGIAFQTNILA 379
           A     A ++A  A   A  GG++  QV  TM+ I  +SR++ADI  VIDGIAFQTNILA
Sbjct: 323 ASNAQNAKEMAATASTVAQEGGEVVAQVVDTMSAINESSRKMADIISVIDGIAFQTNILA 382

Query: 380 LNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSKEIKSVVEASASEVAAGTELVARTT 439
           LNAAVEAARAGE GR FAVVA EVR LAQR AA++KEIK+++E S  +V  G  L  +  
Sbjct: 383 LNAAVEAARAGEQGRGFAVVATEVRNLAQRSAAAAKEIKALIEDSVDKVTVGARLADQAG 442

Query: 440 SQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQAVSHLDGATQQNAALVEQAAATAQ 499
           + M  I E  G+V+SII +++ AS+EQ  GI Q+NQA+  +D  TQQNA+LVE+AAA ++
Sbjct: 443 TTMSGIVENAGKVTSIIGEISAASTEQTAGIEQINQAIMQMDDVTQQNASLVEEAAAASR 502

Query: 500 RLAEQADVLDEAVRLFTVADAAPAQRVAG---TKREVFTVDAARMPAPGIKRHRAPVIAD 556
            L +QAD L + V +F +   A   + A    T     T+  A    P    ++A   + 
Sbjct: 503 ALQDQADALAQIVSIFNLGHTAIGMQDAPRTITPTAPKTIAGAPRSEPKRLGNKAATASA 562

Query: 557 DAEREE 562
            A +EE
Sbjct: 563 QAAKEE 568