Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 523 a.a., chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  474 bits (1220), Expect = e-138
 Identities = 256/523 (48%), Positives = 339/523 (64%), Gaps = 5/523 (0%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N P+T  E        +VS TDL G I Y NP FI +SGF  +ELIG P N++RHP+
Sbjct: 1   MRKNLPITTTERLLEDGKSIVSKTDLQGNILYVNPYFIEISGFEEEELIGAPQNIVRHPE 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MPREAFAD+WAT+++G PW  LVKNR KNGD+YWV ANVTPV E G  VGY+SVR +P R
Sbjct: 61  MPREAFADMWATLKEGLPWNGLVKNRCKNGDYYWVQANVTPVRENGRAVGYMSVRTRPSR 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAITPLAL 180
             V+AAEA Y +  +G++RG+++ RG VVRTG+ G LQ L  LPVA R      +  L  
Sbjct: 121 EQVQAAEAAYRKFSAGQARGLRVHRGAVVRTGLTGWLQGLRELPVARRLGWTMGVLTLMF 180

Query: 181 LLTGLAAWQ-----GAPPAPFWIGFGVATAVSIASCLMLTRQLAAPVRDMSGFATRLAAG 235
           +L G  A       G  P   W+G      + +AS  ML   + AP++        LA G
Sbjct: 181 ILGGAVAGNAVMSAGGSPFAVWLGTAAGALMLLASWAMLHASIVAPLQRAIKAVHGLAGG 240

Query: 236 DLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRT 295
           DL + +      D+G +LQAL QL  NL AI+ DVR  +  M  +  EI++GN+DL+ RT
Sbjct: 241 DLDSHIDTTARGDMGLLLQALQQLNVNLRAIIGDVRRNVESMTISTGEIANGNMDLSGRT 300

Query: 296 ELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGIT 355
           E QA++LEETA+++EE   TV+ NAD+   A   A+ A A A  GG    ++ +TM  I 
Sbjct: 301 EAQASALEETASSVEEFAATVRQNADSAANADRQAQSASAIAQRGGSSVQRMGRTMEEID 360

Query: 356 AASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSK 415
           AAS +I DI G+IDGI+FQTNILALNAAVEAARAGE GR FAVVA EVR LAQR AA++K
Sbjct: 361 AASHKIVDIIGLIDGISFQTNILALNAAVEAARAGEQGRGFAVVAAEVRTLAQRSAAAAK 420

Query: 416 EIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQ 475
           +IK +++ S ++V +G +LV  T   M  +  AV  ++  + ++  AS+EQ+ GI Q+NQ
Sbjct: 421 DIKGLIDDSRAKVESGNQLVRETAQAMGELGGAVENMAVTMAEITVASNEQSGGIEQLNQ 480

Query: 476 AVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLFTVA 518
           AV+ +D  TQQNAALVEQAAA A+ L +QA  L +AV +F ++
Sbjct: 481 AVNAIDETTQQNAALVEQAAAAAENLRDQAVKLSQAVSVFKIS 523