Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 520 a.a., methyl-accepting chemotaxis protein from Herbaspirillum seropedicae SmR1

 Score =  479 bits (1234), Expect = e-140
 Identities = 265/520 (50%), Positives = 342/520 (65%), Gaps = 10/520 (1%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N PVTG E        +VS TDL G I Y NP FI +SGF  +EL+G P NLIRHPD
Sbjct: 1   MRMNMPVTGQERLLIDGKAIVSKTDLKGNITYVNPYFIEISGFEENELLGAPQNLIRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP EAFAD+WATI+ G PWT LVKNR KNGDHYWV ANVTP+ E G +VGY+SVR KPER
Sbjct: 61  MPAEAFADMWATIKGGTPWTGLVKNRSKNGDHYWVRANVTPIRENGQIVGYMSVRTKPER 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGVLGRLQALMRLPVATRAALGYAIT---P 177
            AV  AE LYA +R G+++G+ L RG VVRTG+ G L  L R+ + +R  L   I     
Sbjct: 121 DAVAGAEKLYASIRRGQAKGIALHRGEVVRTGLAGWLGKLSRMQLNSRLNLSMGIMLAIQ 180

Query: 178 LALLLTGLAAWQGAPPAPFWIGFGVATA--VSIASCLMLTRQLAAPVRDMSGFATRLAAG 235
           LA+++ G+AA        +WI    A A  +SI   + L   L  P+         +  G
Sbjct: 181 LAVVVAGMAALH-----QWWISALAAAAALLSIVQWIALRNALIKPLHQALDITHAITGG 235

Query: 236 DLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISSGNVDLARRT 295
           DL+  ++  RHD+LG +L++L Q+  NL AI+ DVR+ +  +    REI+SGN+DL+RRT
Sbjct: 236 DLSVRIETTRHDELGRLLRSLRQMNVNLTAIIGDVRSNVETITLATREIASGNLDLSRRT 295

Query: 296 ELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQVEQTMAGIT 355
           E QAA+LEETA++M EL +TV+ NAD  V+A DLA  A A A  GG        TM  I+
Sbjct: 296 EAQAANLEETASSMHELASTVRQNADHAVQANDLAGTASAIAMRGGDAVASTGTTMNEIS 355

Query: 356 AASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRMLAQRCAASSK 415
            +S +I DI  +ID IAFQTNILALNAAVEAARAGE GR FAVVA EVR LAQR AA++K
Sbjct: 356 ESSHKIVDIISLIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSAAAAK 415

Query: 416 EIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQAEGIRQVNQ 475
           EIK +++AS  +V  G   V + TS MR I  +V RVS I+ ++  A+ +Q+ GI QV++
Sbjct: 416 EIKELIDASVEKVDIGNRQVEQATSTMRDIVASVQRVSGIMGEIKEATQQQSAGINQVHE 475

Query: 476 AVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
           A++ +D +TQQNA+LVE+AAA A  L EQ   L +A+ +F
Sbjct: 476 AITQMDASTQQNASLVEEAAAAAGSLQEQTVRLLQAISVF 515