Pairwise Alignments

Query, 566 a.a., methyl-accepting chemotaxis protein from Burkholderia phytofirmans PsJN

Subject, 529 a.a., PAS domain-containing methyl-accepting chemotaxis protein from Ralstonia sp. UNC404CL21Col

 Score =  414 bits (1063), Expect = e-120
 Identities = 237/529 (44%), Positives = 333/529 (62%), Gaps = 16/529 (3%)

Query: 1   MRNNQPVTGHEYEFPSSHMLVSATDLTGRIQYCNPAFIAVSGFTRDELIGQPHNLIRHPD 60
           MR N PVT  E     +  L+S TDL GRI + NPAF+ +SG+T++EL+G PHNL+RHPD
Sbjct: 1   MRKNLPVTPAETALNPTDYLISRTDLKGRIVFANPAFVRISGYTQEELVGAPHNLVRHPD 60

Query: 61  MPREAFADLWATIRDGRPWTALVKNRRKNGDHYWVHANVTPVVEKGAVVGYLSVRVKPER 120
           MP  AFADLWAT++ G+ W   VKNRRK+G  YWV ANVTPV +   VVGY SVR     
Sbjct: 61  MPEAAFADLWATLQAGKAWRGFVKNRRKDGGFYWVLANVTPVFQNNVVVGYTSVRSMATP 120

Query: 121 TAVRAAEALYARMRSGESRGVQLRRGVVVRTGV-----LGRLQAL------MRLPVATRA 169
             +  A+  Y  +  G++    +R G ++RTG      L ++ +L      ++  +A+  
Sbjct: 121 AQIARAQRAYTAINEGDT-SYTVRAGRILRTGWRRAVNLFQIDSLRFKVIGLQTLIASAI 179

Query: 170 ALGYAITPLALLLTGL--AAWQGAPPAPFWI-GFGVATAVSIASCLMLTRQLAAPVRDMS 226
            +G     +AL    L  AAW        W+ G G A  ++  S ++L R L  P+ + +
Sbjct: 180 LIGTGWAHIALEAADLHGAAWLVFSRDWLWLTGVGCA-GLATMSGVLLARTLIRPLEEAA 238

Query: 227 GFATRLAAGDLTADLQIARHDDLGDVLQALNQLKANLAAIVYDVRAQITGMLDNAREISS 286
             ATRLAAGDLT  +++   D+LG+V++A+  ++A+L++IV D++     +  +  +IS+
Sbjct: 239 TLATRLAAGDLTTVVEVRSSDELGEVMRAMGTMRASLSSIVRDIQDGAANVAHSTLQISA 298

Query: 287 GNVDLARRTELQAASLEETAATMEELTTTVQANADATVRALDLAREAQAAAAVGGKIAGQ 346
           GN DL+ RTE QAA+LEETA++MEELT+ V  NAD    A  LA EA   AA GG++  +
Sbjct: 299 GNHDLSARTEQQAAALEETASSMEELTSMVAQNADHARAASALAEEASTIAADGGQVVQR 358

Query: 347 VEQTMAGITAASRRIADITGVIDGIAFQTNILALNAAVEAARAGEAGRSFAVVAGEVRML 406
           V QTM  I A S+R+ +I   I+ IAFQTNILALNAAVEAARAGE GR FAVVAGEVR L
Sbjct: 359 VVQTMDAIRADSQRVTEIIATIESIAFQTNILALNAAVEAARAGEEGRGFAVVAGEVRSL 418

Query: 407 AQRCAASSKEIKSVVEASASEVAAGTELVARTTSQMRVIDEAVGRVSSIIVDVANASSEQ 466
           AQR A ++ + K ++ AS   V  G +LV +  + M  I ++V  V+ ++ +++ +S EQ
Sbjct: 419 AQRSAQAAAQSKEIIRASDQSVRDGVDLVHKAGATMTQIVQSVQTVTQLMSEISASSREQ 478

Query: 467 AEGIRQVNQAVSHLDGATQQNAALVEQAAATAQRLAEQADVLDEAVRLF 515
           + GI Q+N +VS LDG TQQNA LVE+AAA    LA Q++ L  A+ +F
Sbjct: 479 SSGIAQINASVSQLDGVTQQNATLVEEAAAATSVLARQSEDLKHAIAVF 527