Pairwise Alignments

Query, 510 a.a., ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data) from Burkholderia phytofirmans PsJN

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Rahnella sp. WP5

 Score =  295 bits (756), Expect = 2e-84
 Identities = 175/483 (36%), Positives = 271/483 (56%), Gaps = 12/483 (2%)

Query: 13  PVVEALEVTKRFGSTAALNDVSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTGEVR 72
           P+++   + K F    AL+  ++ V PG   ALVG NGAGKST++ +LTG+ + D G V 
Sbjct: 3   PLLQLTGIDKAFPGVKALSGAALSVYPGRVMALVGENGAGKSTMMKVLTGIYQKDAGSVH 62

Query: 73  FSGAAAPSIADRDAWRERVACVYQHSTIIRDLSVAENLFINRQPLRG-GVIDWQAMRRDA 131
           F G  A     + +    +  ++Q   +I  L++AEN+F+ R+ + G G I+W+ M  +A
Sbjct: 63  FLGKEAVFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFVNGFGRINWKKMYAEA 122

Query: 132 RALLDHWKIDVREDARAGDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIKRLFR 191
             LL    +  + D   GDLS+  +Q+VEIA+ LS+ ++ II+DEPT  L   E   LF 
Sbjct: 123 DKLLARLNLRYKSDRLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETASLFN 182

Query: 192 RISELQREGVTFLFISHHLQEVYEICQAVTVLRDARHIVSAPVSALPREQLIEAMTGERG 251
            I EL+  G   ++ISH ++E++EIC  VTV RD + I   PVS+L  + LIE M G R 
Sbjct: 183 VIRELKAAGCGVVYISHRMKEIFEICDDVTVFRDGQFIAERPVSSLEEDTLIEMMVGRRL 242

Query: 252 GLAVADA-AARGALPADTAVALELKELTGADYEGVSFTVKRGEVVGLTGATSSGRTSVAE 310
                     RGAL       L++++++G   + VSF +  GE++G++G   +GRT + +
Sbjct: 243 EEQYPRINHERGAL------RLQVRDVSGPGVDNVSFDLYSGEILGISGLMGAGRTELMK 296

Query: 311 AIAGLRAAKRGTISVDGAILPPGDVPASLAHGIGCVPKDRHHEGLVLTQSVAENASMTIA 370
            + G    K G +++DG  +        LA+GI  + +DR  +GLVL  SV EN S+T  
Sbjct: 297 ILYGALPRKSGYVALDGREVVTHSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTAL 356

Query: 371 RVLGKFG--IAAPAKKNAFGQKMIDALGIVAQGPEHVVSGLSGGNQQKVVMARALATNPN 428
           R     G  +    ++ A G   I    I        +  LSGGNQQKV +AR L T P 
Sbjct: 357 RYFSHAGGRLKHAEEQQAVGD-FIRLFNIKTPSMMQTIGLLSGGNQQKVAIARGLMTRPK 415

Query: 429 VLVLIDPTAGVDVKSKEALLSVVDRVREEGKAVLVVSGELDD-LRTCDRVLVMFRGRVAA 487
           VL+L +PT GVDV +K+ +  ++++ + EG ++++VS E+ + +   DRVLVM  G ++ 
Sbjct: 416 VLILDEPTRGVDVGAKKEIYQLINQFKREGLSIILVSSEMPEVIGMSDRVLVMHEGHLSG 475

Query: 488 EFP 490
           EFP
Sbjct: 476 EFP 478



 Score = 68.6 bits (166), Expect = 5e-16
 Identities = 59/244 (24%), Positives = 110/244 (45%), Gaps = 7/244 (2%)

Query: 17  ALEVTKRFGSTAALNDVSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTGEVRFSGA 76
           AL +  R  S   +++VS  +  GE   + G  GAG++ L+ IL G     +G V   G 
Sbjct: 255 ALRLQVRDVSGPGVDNVSFDLYSGEILGISGLMGAGRTELMKILYGALPRKSGYVALDGR 314

Query: 77  AAPSIADRDAWRERVACVYQ---HSTIIRDLSVAENLFINRQPL---RGGVIDWQAMRRD 130
              + + +D     +  + +      ++  +SV EN+ +         GG +     ++ 
Sbjct: 315 EVVTHSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSHAGGRLKHAEEQQA 374

Query: 131 ARALLDHWKIDVREDARA-GDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIKRL 189
               +  + I      +  G LS   +Q V IAR L    + +ILDEPT  +D    K +
Sbjct: 375 VGDFIRLFNIKTPSMMQTIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEI 434

Query: 190 FRRISELQREGVTFLFISHHLQEVYEICQAVTVLRDARHIVSAPVSALPREQLIEAMTGE 249
           ++ I++ +REG++ + +S  + EV  +   V V+ +       P+    +E L+ A  G+
Sbjct: 435 YQLINQFKREGLSIILVSSEMPEVIGMSDRVLVMHEGHLSGEFPIEQATQEVLMAAAVGK 494

Query: 250 RGGL 253
           + G+
Sbjct: 495 QYGV 498