Pairwise Alignments

Query, 510 a.a., ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data) from Burkholderia phytofirmans PsJN

Subject, 504 a.a., sugar ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  282 bits (721), Expect = 2e-80
 Identities = 163/496 (32%), Positives = 273/496 (55%), Gaps = 9/496 (1%)

Query: 10  SSVPVVEALEVTKRFGSTAALNDVSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTG 69
           S+ P++    ++K F    ALN+V + + PG+  AL+G NGAGKSTLV ++TG+ +P+ G
Sbjct: 4   SATPLLSLKGISKVFPGVRALNNVHVDLYPGKVTALIGENGAGKSTLVKVMTGIYQPEEG 63

Query: 70  EVRFSGAAAPSIADRDAWRERVACVYQHSTIIRDLSVAENLFINRQPLRGGV--IDWQAM 127
           E+ +            A +  +  ++Q + +  +LSV EN+F+     RG    ++W AM
Sbjct: 64  ELHYKAIPIKLPNPESAHKIGITAIHQETVLFDELSVTENIFVGHYLYRGIFKRLNWPAM 123

Query: 128 RRDARALLDHWKIDVREDARAGDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIK 187
            + AR +L   ++++   A   +LS+  R +V IARALS+ A+ +ILDEPTA L   EI 
Sbjct: 124 HQQARDILTRLEVNIDPHAILKELSIAQRHMVAIARALSFDAQVVILDEPTAALSQHEIV 183

Query: 188 RLFRRISELQREGVTFLFISHHLQEVYEICQAVTVLRDARHIVSAPVSALPREQLIEAMT 247
             ++ +  L++EG   LFISH   E++ I    TVLRD  ++ S  +S +  +Q++  M 
Sbjct: 184 EFYQIVERLKQEGKAILFISHKFDEIFSISDYYTVLRDGSYVGSGKISDISEQQMVTMMV 243

Query: 248 GERGGLAVADAAARGALPADTAVALELKELT-GADYEGVSFTVKRGEVVGLTGATSSGRT 306
           G     A          P DT   LE++ L+   ++ G++F++++GE++G  G   +GRT
Sbjct: 244 GREVSQAYPKVNCE---PGDT--VLEVQNLSHPTEFAGINFSLRKGEILGFYGLVGAGRT 298

Query: 307 SVAEAIAGLRAAKRGTISVDGAILPPGDVPASLAHGIGCVPKDRHHEGLVLTQSVAENAS 366
            + +A+ G+     G I ++G          ++  GI  VP++R  +G ++   +++N S
Sbjct: 299 ELMQALFGVTQPNGGKILINGKEHHFSRPSQAIRAGIVYVPEERQKQGAIIDLPISQNIS 358

Query: 367 MTIARVLGKFGIAAPAKKNAFGQKMIDALGIVAQGPEHVVSGLSGGNQQKVVMARALATN 426
           +     L   G+    K+ A        L + A   +  V  LSGGNQQKVV+A+ LAT 
Sbjct: 359 LPQLSQLNPRGVLNDKKEWALADDYARRLQVKASSWKQAVGTLSGGNQQKVVIAKWLATK 418

Query: 427 PNVLVLIDPTAGVDVKSKEALLSVVDRVREEGKAVLVVSGELDD-LRTCDRVLVMFRGRV 485
           P++++L +PT G+D+ SK A+   +  +   G AV++VS EL + +   DR++VM  G +
Sbjct: 419 PDIIILDEPTKGIDIGSKAAVHQFMSELVGRGLAVIMVSSELPEVMGMADRIIVMHEGLM 478

Query: 486 AAEFPAGWQDHDLIAS 501
            AEF AG    ++I S
Sbjct: 479 VAEFNAGEASAEMIVS 494



 Score = 58.2 bits (139), Expect = 7e-13
 Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 18/228 (7%)

Query: 33  VSIRVMPGESHALVGRNGAGKSTLVSILTGLRKPDTGEVRFSGAAAPSIADRDAWRERVA 92
           ++  +  GE     G  GAG++ L+  L G+ +P+ G++  +G          A R  + 
Sbjct: 277 INFSLRKGEILGFYGLVGAGRTELMQALFGVTQPNGGKILINGKEHHFSRPSQAIRAGIV 336

Query: 93  CV---YQHSTIIRDLSVAENLFI------NRQPLRGGVIDWQAMRRDARAL---LDHWKI 140
            V    Q    I DL +++N+ +      N + +     +W      AR L      WK 
Sbjct: 337 YVPEERQKQGAIIDLPISQNISLPQLSQLNPRGVLNDKKEWALADDYARRLQVKASSWKQ 396

Query: 141 DVREDARAGDLSVEARQLVEIARALSYGARFIILDEPTAQLDGDEIKRLFRRISELQREG 200
            V      G LS   +Q V IA+ L+     IILDEPT  +D      + + +SEL   G
Sbjct: 397 AV------GTLSGGNQQKVVIAKWLATKPDIIILDEPTKGIDIGSKAAVHQFMSELVGRG 450

Query: 201 VTFLFISHHLQEVYEICQAVTVLRDARHIVSAPVSALPREQLIEAMTG 248
           +  + +S  L EV  +   + V+ +   +          E ++ A +G
Sbjct: 451 LAVIMVSSELPEVMGMADRIIVMHEGLMVAEFNAGEASAEMIVSAASG 498