Pairwise Alignments

Query, 1154 a.a., alpha-amylase from Burkholderia phytofirmans PsJN

Subject, 540 a.a., oligo-1,6-glucosidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  225 bits (574), Expect = 6e-63
 Identities = 173/563 (30%), Positives = 256/563 (45%), Gaps = 132/563 (23%)

Query: 42  WYKDAIIYQVHIKSFFDANNDGVGDFPGLIAKLDYIAELGVNAIWLLPFYPSPRRDDGYD 101
           W++ A+IYQ++ +S  D N DGVGD  G+I KLDYIA L V+AIW+ PF+ SP  D GYD
Sbjct: 6   WWRGAVIYQIYPRSLLDTNGDGVGDLRGIITKLDYIASLNVDAIWISPFFKSPMADFGYD 65

Query: 102 IADYRNVHPDYGNLSDVKRFIQEAHARGIRVITELVINHTSDQHPWFQRARRAKPGSNHR 161
           I+DYR + P +G++ D    I++AH RGI+VI + V++HTSDQH WF  +R ++      
Sbjct: 66  ISDYREIDPLFGSMQDFDELIEKAHQRGIKVIIDQVLSHTSDQHAWFIESRESRTNPK-A 124

Query: 162 NYYVWSDTDQKYQETRIIFIDSEPSN----------WTHDPVAGAYYWHRFYSHQPDLNF 211
           ++YVW+D  +          D  P N          W  +P    YY H F   QPD+NF
Sbjct: 125 DWYVWADPRE----------DGTPPNNWLAIFGGCAWEWEPRRQQYYLHNFLRSQPDINF 174

Query: 212 DNPAVLKEVLQVMRFWLDMGIDGLRLDAV-----------------------------PY 242
            NP V + VL  + FWL  G+DG RLDA+                             PY
Sbjct: 175 HNPDVRQAVLDNVEFWLKKGVDGFRLDAITFCFHDELLRDNPAKPKEKRQGRGFSEDNPY 234

Query: 243 LVEREGTNNENLPETHAVLKKIRATIDAEYPNRMLLAEANQWPED----VKEYFGDEDEC 298
             +    NN+  P+T   ++ +R  I+  YP  + L E +   ED    +  Y   +D  
Sbjct: 235 AYQYHYYNNDR-PQTIQFIEALRQLIN-RYPGTVTLGEVS--AEDSLAVMAAYTKGDDRL 290

Query: 299 HMAFHFPLMPRIYMSIASEDRFPITDIMRQTPDLAATN------QWAIFLRNHDELTLEM 352
           HMA+ F L+   Y +            +RQT +    +       WAI   NHD      
Sbjct: 291 HMAYSFELLTDDYSAA----------YIRQTVEALENSIGDGWPCWAI--GNHDV----- 333

Query: 353 VTDSERDYLWNTYASDRRARLNLGIRRRLAPLMERDRRRIELINSLLLSMPGTPVIYYGD 412
                           +R     G  ++ + +        +++N++L S+ G+   Y G+
Sbjct: 334 ----------------QRVASRWGRGKQTSDM-------AKMLNAMLCSLRGSVCSYQGE 370

Query: 413 ELGMGD---NIH-------------LGDRDGVRTPMQWSSDRN-GGFSRADPEQLVLPPV 455
           ELG+ +     H                RDG RTPM W    +  GFS+  P      P+
Sbjct: 371 ELGLTEVPIEFHELQDPFGKTFWPMFKGRDGCRTPMPWEQYADFSGFSQVSP----WLPI 426

Query: 456 MGSLYGFDAVNVEAQSRDPHSLLNWTRRMLATRRAKQTFGRGTIRFL-KPENRKILAYLR 514
             +     A+ V+ Q  D HS+L+  R+ LA R+         I FL  PE   +L ++R
Sbjct: 427 AAA---HRALAVDLQEADCHSVLHGYRQFLAWRKCYPALITSEIEFLDAPE--PLLVFVR 481

Query: 515 EMPGEPPILCVANLSRAPQAVEL 537
           ++ GE  +L   NL  A   + L
Sbjct: 482 KL-GEQKLLVCFNLLDAETQLSL 503