Pairwise Alignments

Query, 260 a.a., ABC transporter from Burkholderia phytofirmans PsJN

Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  192 bits (487), Expect = 2e-53
 Identities = 108/252 (42%), Positives = 160/252 (63%), Gaps = 13/252 (5%)

Query: 3   DVDALTVRF-------KTKTGYFEAVREASFHVGEGEVFGLVGESGSGKSTILRALTGLA 55
           + D+L V F       +   G+ +AV  A+ +V  GE  G+VGESGSGK+T+  A+  L 
Sbjct: 275 ETDSLKVWFPIQRGILRRTVGHVKAVNNATLNVRAGETLGVVGESGSGKTTLALAILRLI 334

Query: 56  PIAGGTMTIGSHVPGEKIN--RSFRRDVQMVFQDPYGALHPRFTVDQTLREPLSINGIDR 113
              G  +  G ++ G K    R  R+D+Q+VFQDPYG+L PR T+ Q + E L ++G++ 
Sbjct: 335 SSEGRIVYAGENIQGWKSRDLRRLRKDMQVVFQDPYGSLSPRMTIAQIIAEGLGVHGLEP 394

Query: 114 ---QDKRIVDALNEVGLGPAYRFRYPHQLSGGQRQRVSIARALIVEPRVLLLDEPTSALD 170
                + + + L EVGL PA   RYPH+ SGGQRQR++IARA+I+ P++++LDEPTSALD
Sbjct: 395 GADPRRMVAEILVEVGLDPAMMDRYPHEFSGGQRQRIAIARAMILRPKLVVLDEPTSALD 454

Query: 171 VSVQAEILNLLRRLHRERNLTMILVSHNLAVVGFLCSRVAVMRNGEIVEQCDIASIRAQQ 230
           ++VQ +I+ LLR L R+  L  I +SH+L VV  L  +V VMR G++VE  +   I  ++
Sbjct: 455 MTVQVQIVELLRALQRKYGLAYIFISHDLKVVRALSHKVIVMRQGDVVEMGEGRQI-FER 513

Query: 231 VEHEYTRRLLLA 242
              +YT++LL A
Sbjct: 514 PRSDYTKQLLAA 525



 Score =  162 bits (410), Expect = 1e-44
 Identities = 105/264 (39%), Positives = 152/264 (57%), Gaps = 15/264 (5%)

Query: 1   MIDVDALTVRFKTKTGYFEAVREASFHVGEGEVFGLVGESGSGKSTILRALTGLAP---- 56
           ++ V  L V F+      EAV+  SF V +GE   LVGESGSGKS    +   L P    
Sbjct: 5   VLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAE 64

Query: 57  IAGGTMTIGSHVPGEKINRSFRR----DVQMVFQDPYGALHPRFTVDQTLREPLSIN-GI 111
           ++G     G+ + G    R  RR    DV  +FQ+P  +L+P   +++ + E L+++ G+
Sbjct: 65  VSGSITYAGTEMVGAP-ERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTLHQGL 123

Query: 112 --DRQDKRIVDALNEVGLGPAYRF--RYPHQLSGGQRQRVSIARALIVEPRVLLLDEPTS 167
             D    R+++ L +VG+  A      YPHQLSGGQRQRV IA AL   P +L+ DEPT+
Sbjct: 124 TGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIADEPTT 183

Query: 168 ALDVSVQAEILNLLRRLHRERNLTMILVSHNLAVVGFLCSRVAVMRNGEIVEQCDIASIR 227
           ALDV++QA+IL+LL  L     ++++ ++H+L +V  +  RV VM+ GEIVE    A I 
Sbjct: 184 ALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPTAEIF 243

Query: 228 AQQVEHEYTRRLLLATTGYQREPV 251
           A   +H YTR+LL A    Q +PV
Sbjct: 244 ANP-QHPYTRKLLAAEPSGQPDPV 266