Pairwise Alignments

Query, 537 a.a., ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

Subject, 526 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  178 bits (451), Expect = 5e-49
 Identities = 144/513 (28%), Positives = 228/513 (44%), Gaps = 33/513 (6%)

Query: 8   MRRRGLMRTAAIALACGLSFVGAAAGAQARSLTMALASEPQSLDPLFSRTQNNMQTAENM 67
           M R      +A+A A  ++    A  A A +L     ++  SLDP    + +N+    ++
Sbjct: 1   MSRLNRFLISALA-AAAIAAPALATSASAATLRWGSRADIYSLDPDSVPSTSNLAFLNHI 59

Query: 68  FERLIEQDDNLQVRPGLAVSWRAVDPLTWEFHLRPHVRFSDGSTMTADDVAYSLRRARSV 127
           +E LI    N ++ P LA  W+ +D   W F LR  V+F DG+  TADDV  S+ R   V
Sbjct: 60  YEGLIRYGPNFEIEPALATEWKLIDSKHWRFTLRKGVKFHDGADFTADDVVASMNR---V 116

Query: 128 PNSPAPYSGAVANIERIEVVDPLTLRIVTKTPSPAFVEQIGLVYIVS--------QHASA 179
            +  +P  G +     ++ VD  T+ I    PS  F+  +  +++ S             
Sbjct: 117 SDPTSPLRGNIPLYVGVKKVDDFTVDIEVSAPSALFLNDMSNIFMFSAKWLKDNNAEKPT 176

Query: 180 GHASNDYRLPAVAV-GTGPYRLVRWIPGDRLELVRNDYYWG-KRPIFDTCTIRFVSNDAA 237
             ASN          GTGP++L   +P  +  L+ ND +W  K+   D      +S+ A 
Sbjct: 177 DIASNTENYATHNTNGTGPFKLESRVPDSKTVLLVNDQWWDQKKHNLDRIEYIPISSAAT 236

Query: 238 RLSALLSGSVDLIDNVPPVTIGRLRRERNVTLYSGPSARLIYLALDSSRDASPFVTAADG 297
           R++ALLS  +DL+D+ P   + RL     +T+      R +++  +            DG
Sbjct: 237 RVAALLSSEIDLLDSAPIQDLPRLESSPGITVSKRTELRTVFIGFNGKEKLE------DG 290

Query: 298 SAIARNPLRDVRVREAISKMIDRNAITQHLLNGAGLPAAQIVPPGMGGYDPQLQPDRYDP 357
                NP  D+RVR+A+   IDR+ I + ++ G   P+  ++ P + GY   L  D Y P
Sbjct: 291 RP---NPFLDLRVRQAVEASIDRDLINKKIMRGLARPSGSLIAPEIAGYAKSL--DTYQP 345

Query: 358 VG---AQRLLVAAGYPNGFRLTIHSSNDRFASDGDLGQALGQMLARGGIAVSDVVTQPYN 414
                AQ+LL  AG  +    T    ND   ++ D+   +  ML R G   + +   P  
Sbjct: 346 ADSKLAQKLLEDAGQKD-LAFTYLCMNDESINEEDICSGIANMLKRAGFQPT-IDMGPRA 403

Query: 415 VYAGAAARRSYSAFVFSFGN-TTSDSAIALTNVLESYSRESGTGAFNRTRYSNPTLDRLL 473
           V            F  S+ N  T D+   L+ VL   +R   TG  N   +S P LD L+
Sbjct: 404 VQQPKRTNGKADMFNLSWANEPTLDAYSLLSQVLS--TRSGSTGVSNYGGWSYPELDDLV 461

Query: 474 REAAATFDPARRDQLLQQAAHAGFSDYGIVPLY 506
           ++AA   D A+R  L +QA         ++PL+
Sbjct: 462 KKAAQEPDTAKRLALEEQALKIAKDKAILIPLH 494