Pairwise Alignments

Query, 306 a.a., LysR family transcriptional regulator from Burkholderia phytofirmans PsJN

Subject, 300 a.a., putative DNA-binding transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  170 bits (431), Expect = 3e-47
 Identities = 97/287 (33%), Positives = 160/287 (55%)

Query: 3   LSFEVLQVLDAIDRTGTFASAAETLHKVPSSLSYLVQKLELDLGVKLFDRTGRRATLTHA 62
           LS + +Q++D + R G+F +AA  LHKVPS++SY V+++E DLGV LF+R  R  +LT A
Sbjct: 2   LSEQSMQLIDMVARVGSFTAAANKLHKVPSAVSYAVKQVEEDLGVVLFERHHRSVSLTPA 61

Query: 63  GRVVVEEGRRLLEAAEALEFKAKRIEHGWESELHVAVDEIIPFDLLWHHVGEFYKLKLDT 122
           G   V++ R +L    +L+   KR+ +GW+  L +A+D I+  D + + + +FY+   + 
Sbjct: 62  GEHFVKQVRSMLTHLASLKEDTKRVANGWQPTLSIALDNIVRADKISNLIADFYRHFDNV 121

Query: 123 RLHLSKEVLGGSWDALLTRRADLIVGAAGDPPPIPNLIARPIGSLKHVFVVAPDHPLASI 182
            L +  EV  G W+A+ T R+D+ +GA    P   +   + +G ++  F+V+  HPLA+I
Sbjct: 122 ELIIRIEVFNGVWEAIATGRSDIAIGATTAIPVGGDYRFKDMGDIEWTFLVSKHHPLAAI 181

Query: 183 PGPLTMDMVARHRAVAIGDTSRKLAPRTIALAVNQEVLTVPTLEAKLAAQIRGLAAGTIP 242
             PL  D +  + ++ + DTSR++  R   L  NQ  L VP     +     GL  G +P
Sbjct: 182 DRPLLDDELRSYPSICLEDTSREIPKRMTWLLDNQRRLVVPDWIRAINCFREGLGIGYMP 241

Query: 243 ECLAVDALSQGELVQKEVIGMRDVTHFYLAWRDDESGKALQWWVDQL 289
           +  A   +  G L++KE+   +  +   LAW D     A+ W +D L
Sbjct: 242 KHFATPFVQAGALIEKELERPKAPSPCCLAWNDANMSPAMAWVLDYL 288