Pairwise Alignments

Query, 498 a.a., RND transporter from Burkholderia phytofirmans PsJN

Subject, 495 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Pseudomonas stutzeri RCH2

 Score =  310 bits (793), Expect = 1e-88
 Identities = 181/468 (38%), Positives = 265/468 (56%), Gaps = 1/468 (0%)

Query: 6   ACRALTTLASAALLAACTVGPNYERPQAEVPPTWQTDSYWRVAVPSHAPISPDWWNAFSD 65
           A R L     A  L ACT+GP+Y+RP   V   ++    W+ A P+ A    +WW  + D
Sbjct: 14  ALRPLAVAVLALSLGACTLGPDYQRPDLPVASEFKQAEGWKPATPADALQRGEWWRLYGD 73

Query: 66  PTLATLETQALAQNQTLVAASAHYEQARATLANDRAQQIPEVDLAAQGSRFRISQNRPRT 125
             L  L ++    NQ + AA A + QARA +   R+Q  P +  +A  SR     +   +
Sbjct: 74  AELDALVSRLNVSNQNIAAAEAQFRQARALVRGARSQLFPILSGSAGVSR-SAQGSGSTS 132

Query: 126 NYGTPTTSTVQNNVQLGPTISYDTDLFGRIRREVEGAAASAQQSADDLANARLVLTTDLA 185
           + G+     V  + + G + S++ D++GR+RR +E   A+ Q SA DLA ARL L  +L 
Sbjct: 133 STGSTFNGGVGESYEAGLSASWEADIWGRLRRNLEANRANMQASAADLAAARLSLQAELV 192

Query: 186 SDYFSLRELDAEIDVLNQSVKLQQKALDYVTTEHDLGSVSGLDVLQQKSLLDSTRVQAQL 245
             Y  LR +D    +L+Q+V+   ++L     ++  G V   DV Q ++ L ST+ QA  
Sbjct: 193 QTYLQLRVIDEHQRLLDQTVEAYARSLRLTENQYRAGIVPRSDVSQAQTQLKSTQAQAID 252

Query: 246 LLNQRAQFEHAIAALVGVPAPQFSIEPKVLAVQVPAIALGVPSDVLQRRPDVASAERAMA 305
           L  QRAQ EHAIA LVGV   +  I  +     +PAI L VPS +L+RRPD+ASAER + 
Sbjct: 253 LKWQRAQMEHAIAVLVGVAPSELGIAVREDIPPLPAIPLAVPSQLLERRPDIASAERQVM 312

Query: 306 AANAQIGVAKAAFFPSLTLAPSIGWESTQFASLLSAPTLMWTLGAAVGQVLFDGGRRAAN 365
           AANA IGVA+AA++P LTL+ S G+ ++ F+ L S P   W+LG  +   L D G R A 
Sbjct: 313 AANANIGVAEAAWYPELTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGGRRAE 372

Query: 366 VKFASEGYKATEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSSEAVTDARHLLALANDR 425
           ++ A   Y  T A+YRQTVL +F++V+D +  L VL+  A    EA+  A+  L L  ++
Sbjct: 373 LERAEASYDQTVASYRQTVLNSFREVEDYLVQLRVLEEEAVVQREALEAAQESLRLIENQ 432

Query: 426 YSGGLVAYLDVITAQQSLLTSERQDVQIHGQQMTLSVSLVKALGGGWD 473
           Y  G V +L V T Q + L ++R ++ + G ++T SV L+ ALGGGWD
Sbjct: 433 YRAGTVDFLSVATVQTTALNNQRTNLTLLGDRLTASVLLIAALGGGWD 480