Pairwise Alignments

Query, 498 a.a., RND transporter from Burkholderia phytofirmans PsJN

Subject, 499 a.a., RND efflux system, outer membrane lipoprotein, NodT (NCBI) from Rhodospirillum rubrum S1H

 Score =  208 bits (530), Expect = 3e-58
 Identities = 139/466 (29%), Positives = 227/466 (48%), Gaps = 8/466 (1%)

Query: 10  LTTLASAALLAACTVGPNYERPQAEVPPTWQTDSYWRVAVPSHAPISP-DWWNAFSDPTL 68
           ++ +A  ALL  C+  P+Y+RP A VP  W     +  A      I+   W   F DP L
Sbjct: 18  MSCVAVLALLGGCSFIPDYQRPAAPVPTAWPDGPAYDQAQAGGETIATLGWREFFRDPAL 77

Query: 69  ATLETQALAQNQTLVAASAHYEQARATLANDRAQQIPEVDLAAQGSRFRISQNRPRTNYG 128
             L  QAL  N+ L +A+   E ARAT   +RA  +P V+    G      Q  PRT   
Sbjct: 78  QRLIAQALEHNRDLRSAALTVESARATYRIERADLLPTVN----GGTDLTHQRTPRTATQ 133

Query: 129 TPTTSTVQNNVQLGPTISYDTDLFGRIRREVEGAAASAQQSADDLANARLVLTTDLASDY 188
           T    T  N      T SY+ D FGRIR   E A      + +   + ++ L  ++A+ Y
Sbjct: 134 TGKAQTTTNYSANIGTTSYEIDFFGRIRSLEEEALEQYFATEEARRSVQIALIAEVANAY 193

Query: 189 FSLRELDAEIDVLNQSVKLQQKALDYVTTEHDLGSVSGLDVLQQKSLLDSTRVQAQLLLN 248
            +L      + +  +++  + ++ +      D G  + LDV Q ++ +++ R    +   
Sbjct: 194 ITLLADRTLLQLTEETLNTRIESFNLTQQSFDRGVGTRLDVTQAQTTVETARANRAIYTR 253

Query: 249 QRAQFEHAIAALVG--VPAPQFSIEPKV-LAVQVPAIALGVPSDVLQRRPDVASAERAMA 305
             AQ  +A+  LVG  + A   +  P + L    P +  G+PSD+L RRPD+  AE  + 
Sbjct: 254 YVAQDINALRLLVGDQLDANLLAGTPPLDLGRFFPNVPAGLPSDLLLRRPDILEAEHKLV 313

Query: 306 AANAQIGVAKAAFFPSLTLAPSIGWESTQFASLLSAPTLMWTLGAAVGQVLFDGGRRAAN 365
           AANA IG A+AAF+P ++L  ++G  S     L S+ +L W++G ++   LFD  R  A 
Sbjct: 314 AANANIGAARAAFWPKISLTGNLGTASASLGDLFSSGSLAWSVGPSLSVPLFDFWRNEAT 373

Query: 366 VKFASEGYKATEANYRQTVLTAFQQVQDGITGLSVLDGAAKQSSEAVTDARHLLALANDR 425
           ++ A    +   A Y +++ TAF++V D +     L    +   + V   +   AL+ +R
Sbjct: 374 LESAKVQREIAVAAYEKSIQTAFREVADALAAKGTLGDQLRAQQDLVAATQESYALSRNR 433

Query: 426 YSGGLVAYLDVITAQQSLLTSERQDVQIHGQQMTLSVSLVKALGGG 471
           Y  G+  YL  + +Q+SL  +++  + +   Q+T  ++L K LGGG
Sbjct: 434 YDQGIDNYLSTLDSQRSLYAAQQDLISVRANQLTNYITLYKVLGGG 479