Pairwise Alignments

Query, 381 a.a., DNA-directed DNA polymerase from Burkholderia phytofirmans PsJN

Subject, 430 a.a., DNA polymerase IV from Sinorhizobium meliloti 1021

 Score =  159 bits (401), Expect = 2e-43
 Identities = 114/365 (31%), Positives = 177/365 (48%), Gaps = 32/365 (8%)

Query: 7   IAHIDMDAFFASCELSQYPELRGQAMVVAGRRSDAPRVNADGTREFARLRDYAGRGVLTT 66
           +AHID DAF+AS E    PEL  + +++ G +                      RGV++T
Sbjct: 45  LAHIDCDAFYASVEKRDNPELADKPVIIGGGK----------------------RGVVST 82

Query: 67  ATYEARAFGVHSGMPTMQAARLAPDAILLPVNFDLYRTYSRLFKDAIRSVSPTIEDVGID 126
           A Y AR  GV S MP  +A    P A+++  + + Y    R  +  ++ ++P ++ + ID
Sbjct: 83  ACYIARIHGVRSAMPMFKALEACPQAVVIKPDMEKYVRVGREVRAMMQELTPLVQPLSID 142

Query: 127 EVYADLS----LLNDESEQIARKLKSAVFEATNLTCSVGIAPNKLLAKLCSDIQKPDGIT 182
           E + DLS    L +D   +   +    V +   +T SVG++  K LAK+ SD+QKP G +
Sbjct: 143 EAFLDLSGTERLHHDPPARTLARFAKRVEQEIGITVSVGLSYCKFLAKVASDLQKPRGFS 202

Query: 183 ILRLEDLQARIWPMAAKKINGIGPKANAKLTSLGITTIGEIAACSEQWLIEQFGRSYGAW 242
           ++   +    +       I G+G    A L   GI  IG++    E  L+ ++G + G  
Sbjct: 203 VIGQAEAADFLKAKPVTLIWGVGKAFAATLERDGIRAIGQLQTMEEADLMRRYG-TMGRR 261

Query: 243 LHRVSHGLDDRPVVTHSEPVSMSRETTFEQDLHAVRHRQELGTAFTRLCEQVALDLQRKG 302
           L+R+S GLD+R V    E  S+S ETTF  DL     +++L      L EQVA  L++  
Sbjct: 262 LYRLSRGLDERSVEIDGEAKSVSSETTFNDDL---ARQEDLVAHLRGLSEQVAFRLRKSA 318

Query: 303 YLARRIGIKLRFNDFQTVTRDVTLPEPVADAKALRHAATQCL-KRVDLVKSIRLLGVKAG 361
              + + +KL+  DF+T TR+  L  P   A  +     Q L K VD  K  RL+G+   
Sbjct: 319 LAGQTVVLKLKTADFKTRTRNRRLESPTRLADRIFRTGLQLLEKEVDGTK-YRLIGIGVS 377

Query: 362 GLQRP 366
            L  P
Sbjct: 378 DLVDP 382