Pairwise Alignments

Query, 381 a.a., DNA-directed DNA polymerase from Burkholderia phytofirmans PsJN

Subject, 421 a.a., DNA-directed DNA polymerase (NCBI) from Rhodospirillum rubrum S1H

 Score =  183 bits (465), Expect = 7e-51
 Identities = 127/383 (33%), Positives = 191/383 (49%), Gaps = 47/383 (12%)

Query: 7   IAHIDMDAFFASCELSQYPELRGQAMVVAGRRSDAPRVNADGTREFARLRDYAGRGVLTT 66
           IAHID DAF+AS E    P LR + ++V                         GRGV TT
Sbjct: 38  IAHIDCDAFYASVEKRDNPSLRDRPLIVGHP---------------------GGRGVATT 76

Query: 67  ATYEARAFGVHSGMPTMQAARLAPDAILLPVNFDLYRTYSRLFKDAIRSVSPTIEDVGID 126
           A Y AR FG  S MP  +   L P+A+++P +   Y+  S   +  +   +  +E + +D
Sbjct: 77  ACYIARRFGARSAMPMFKCLELCPEAVVIPPDMAKYKAVSAQVRAIMLEATHRLEPLSLD 136

Query: 127 EVYADLSLLNDESEQ------------IARKLKSAVFEATNLTCSVGIAPNKLLAKLCSD 174
           E Y DLS    E E             IAR+++  +     +T S+G++ N+ LAKL SD
Sbjct: 137 EAYLDLS----EGEHRFARPPAVSLATIARRVEREI----GITVSIGLSSNRFLAKLASD 188

Query: 175 IQKPDGITILRLEDLQARIWPMAAKKINGIGPKANAKLTSLGITTIGEIAACSEQWLIEQ 234
           + KP G T++   +  A + PM  K+++G+G     +L  LG+ TIG++    E  L+ +
Sbjct: 189 MNKPQGFTVIDEAEAPALLAPMPVKRLHGVGAATERRLAELGLHTIGDLQGRPEADLLAR 248

Query: 235 FGRSYGAWLHRVSHGLDDRPVVTHSEPVSMSRETTFEQDLHAVRHRQELGTAFTRLCEQV 294
           FG+  G  LH  + G   R +    E  S+S ETTFE+DL  +    +L  A   L E+V
Sbjct: 249 FGK-IGRALHAHAWGRGGRTISPDRETKSISAETTFERDLSRL---PDLARALGPLSERV 304

Query: 295 ALDLQRKGYLARRIGIKLRFNDFQTVTRDVTLPEPVADAKALRHAATQCLKRVDLVKSIR 354
           A  L R       + +KL+ +DF+ +TR   L +P A A+ +  AA + L+R    +  R
Sbjct: 305 ARALTRNALAGATVVLKLKTHDFRILTRHARLGDPTARAEVIAGAARRLLERETDGRRFR 364

Query: 355 LLGVKAGGLQRPGATESDAPAQF 377
           L+GV    L RPG +E+D P  F
Sbjct: 365 LIGVGMADL-RPG-SEADPPDLF 385