Pairwise Alignments

Query, 451 a.a., histidine kinase from Burkholderia phytofirmans PsJN

Subject, 455 a.a., sensor histidine kinase from Herbaspirillum seropedicae SmR1

 Score =  162 bits (409), Expect = 3e-44
 Identities = 141/464 (30%), Positives = 203/464 (43%), Gaps = 52/464 (11%)

Query: 14  LLARNIALLIALVMLSQVCALGVLLHYVQRPRVERAAAVFATYVTTLDNLLAATPPAARQ 73
           L  R   LL  L+  S V  +       + PR E+ AA   + VT     L  + P  R+
Sbjct: 16  LFWRTFFLLTFLITASMVAWVASFRMVERGPRAEQLAAQIVSVVTITRAALTHSAPEMRR 75

Query: 74  GLTARLDA-------------RAQAPDEAAAAPPPNLMRAYRTYQRNVFLESLRAHLPAD 120
            L   L +             R   P+++   P           +  +F  S+       
Sbjct: 76  ELLFDLASNEGIRIYPLEKSDRIVPPEDSPIVPELEYYVRQSLDENTLFASSVN------ 129

Query: 121 MPARWQTLGGQRLWIRMHAPADAPQTPYWIALPIPEDAQGNGLDAAILLSLGLGALAALT 180
                     +  WI  +   D     YW+ L      +G     + L  LG G++A   
Sbjct: 130 --------DVEGFWISFNIDDDK----YWLMLD-----RGRLDRTSSLQWLGWGSIALFL 172

Query: 181 GYL----IQRHLNRPLQELTRAARRVSAGETPAPLPTDGPTEIAAVSGAFNQMTQALQQA 236
             +    I   +N+PL  LT AAR ++ G  P PLP  GPTEI   + +FNQM   L + 
Sbjct: 173 SLIGAVFISTLINQPLARLTAAARAIAKGRQPEPLPESGPTEIEEANRSFNQMVADLNRI 232

Query: 237 EATRALMLAGISHDIRTPLTKLRLSMAMAMPNDSDSSFVVAAESYLDQIETILQQFMDYA 296
           E+ RAL+LAGISHD+RTPL +++L + MA  +D          S L Q+++I+ QF+DYA
Sbjct: 233 ESDRALILAGISHDLRTPLARMQLEVEMANLSDEARD---GMHSDLAQMDSIIGQFLDYA 289

Query: 297 GSGEREQPEPGDLNALIERLAGDFAGLGH-EFELSLATLPAVPYRPISMMRLLMNLMQNA 355
              +    E  DL  +++ +AG+ + L        +     V      + R+  NL++NA
Sbjct: 290 KPFDTSSLETIDLADVLQDVAGNASRLSDIRVHTQITPDTQVAGNGTELARVFSNLVENA 349

Query: 356 IVYG---GSGLA---VRSWATREAVYVAVGDRGKGLSAQELEQLKAPFQRGRNARTHSGG 409
             YG   G+  A   +RS      V V V D G G+   E E+L  PF R   AR  + G
Sbjct: 350 RRYGKTEGTDCAEIDIRSRIEGHQVVVEVADHGPGVPVNECERLLRPFTRLDTARGQANG 409

Query: 410 TGLGLAIVERIARLHGGS--LEFHTREGGGLEVWVVLPLGASTR 451
           +GLGLAIV RI   H G   L+ H     GL V + LPL    R
Sbjct: 410 SGLGLAIVNRIVLKHNGKLLLKGHEETRSGLLVQITLPLQGHRR 453