Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 519 a.a., sugar ABC transporter ATP-binding protein from Ralstonia solanacearum IBSBF1503

 Score =  436 bits (1122), Expect = e-127
 Identities = 227/502 (45%), Positives = 334/502 (66%), Gaps = 6/502 (1%)

Query: 4   PTSAVP---RLELRHAS---KSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILA 57
           P + VP   R  L HAS   K+F  V AL +  L++  G VHAL+GENGAGKST++KIL+
Sbjct: 12  PDTVVPTATRDALLHASGLCKAFAGVTALDNVGLSVHAGRVHALMGENGAGKSTMMKILS 71

Query: 58  GVHQPDTGELVVDGEARRFATPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRIG 117
           GV+  D G L   G   +  +P +A   G+A+I+QE  L  D+++AENI++GR+P + +G
Sbjct: 72  GVYLADRGALYKHGRPLQLRSPRDALRHGIAMIHQELNLLPDMTVAENIWIGREPRNPLG 131

Query: 118 RIQYDAMRREVDGLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAA 177
            + +  +RR    LL+ L + +  D  +  LSIA +Q+IEIAKA+S  +++LIMDEPT+A
Sbjct: 132 LVDHGELRRRTAQLLSRLEIHIDPDTELGDLSIASRQMIEIAKAVSCESDLLIMDEPTSA 191

Query: 178 LSLPEVERLFTIVRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTE 237
           ++  EVE LF I+ +L+    AI++ITH++DEVF +   V+++RDG  V  G     +  
Sbjct: 192 ITDREVEHLFRIIAELKRAGKAIIYITHKMDEVFRIADDVSVLRDGRYVAGGPANGFDHA 251

Query: 238 AIVAKMVGRDLETFYPKAERPPGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAG 297
           A++  MVGR+L   YPK +  PGEV L+VRGLTR GV++D+SF+VRAGE++ +AGL+G+G
Sbjct: 252 ALITAMVGRELSEIYPKVDVAPGEVVLAVRGLTRRGVYRDVSFEVRAGEVLGVAGLMGSG 311

Query: 298 RSEVARAIFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARN 357
           R+EV  ++FGI P D+GE+ + G R+    P  A+  G+A + EDR++ G  L LS+  N
Sbjct: 312 RTEVMESLFGIVPADAGEVHLDGARVQLRHPGDAIARGMAFLTEDRKKSGAFLSLSVGCN 371

Query: 358 ASMTVLGRLVKHGLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLA 417
             ++ LGR    G +     T+       +LR+K    +  +  LSGGNQQKV++ +WL 
Sbjct: 372 MEISALGRHCTAGFVRQHEMTRKCEAMRRQLRIKTPSLDEAIENLSGGNQQKVLIARWLL 431

Query: 418 TGPKVLIIDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEG 477
             P+VLI+DEPTRGID+GAKAE+Y  +  L + G+A++M+SSELPEV+GM+DR+LVMH+G
Sbjct: 432 NTPRVLILDEPTRGIDIGAKAEIYRLIGMLAQSGVAIIMVSSELPEVMGMSDRILVMHQG 491

Query: 478 RISADIARADADEERIMGAALG 499
            +   +AR D  +ERIM  A G
Sbjct: 492 SVGGLLARPDFSQERIMALASG 513



 Score = 89.7 bits (221), Expect = 2e-22
 Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 20/262 (7%)

Query: 249 ETFYPKAERPPGEVRLSVRGLTR----VGVFKDISFDVRAGEIVALAGLVGAGRSEVARA 304
           +T  P A R   +  L   GL +    V    ++   V AG + AL G  GAG+S + + 
Sbjct: 13  DTVVPTATR---DALLHASGLCKAFAGVTALDNVGLSVHAGRVHALMGENGAGKSTMMKI 69

Query: 305 IFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLG 364
           + G+   D G ++  G+ L    P  A+R G+A++    ++  L  ++++A N  +    
Sbjct: 70  LSGVYLADRGALYKHGRPLQLRSPRDALRHGIAMI---HQELNLLPDMTVAENIWIGREP 126

Query: 365 R----LVKHGLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGP 420
           R    LV HG +  R+   L+     RL +   DP+  +G LS  ++Q + + K ++   
Sbjct: 127 RNPLGLVDHGELRRRTAQLLS-----RLEIHI-DPDTELGDLSIASRQMIEIAKAVSCES 180

Query: 421 KVLIIDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRIS 480
            +LI+DEPT  I       ++  +AEL R G A++ I+ ++ EV  +AD V V+ +GR  
Sbjct: 181 DLLIMDEPTSAITDREVEHLFRIIAELKRAGKAIIYITHKMDEVFRIADDVSVLRDGRYV 240

Query: 481 ADIARADADEERIMGAALGQPM 502
           A       D   ++ A +G+ +
Sbjct: 241 AGGPANGFDHAALITAMVGREL 262