Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 504 a.a., sugar ABC transporter ATP-binding protein from Pantoea sp. MT58

 Score =  429 bits (1102), Expect = e-124
 Identities = 227/495 (45%), Positives = 323/495 (65%), Gaps = 2/495 (0%)

Query: 6   SAVPRLELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVHQPDTG 65
           +A P LE+R  ++ FG   AL   DL +WPGEVHAL+GENGAGKST++KILAG +   +G
Sbjct: 2   TATPILEMRGITRRFGNFYALKGVDLTVWPGEVHALMGENGAGKSTLMKILAGAYTASSG 61

Query: 66  ELVVDGEARRFATPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRIGRIQYDAMR 125
           E++++G+      P EA  AG+ +IYQE  L  +L++AENIF+G + +   G ++   M 
Sbjct: 62  EILIEGKPWALKGPKEALAAGITLIYQEINLAPNLTVAENIFLGSE-IAPGGLVKRRQMA 120

Query: 126 REVDGLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAALSLPEVER 185
            E   ++  LG    A  LV  LSIA+QQ +EIA+AL  N+ +L+MDEPTAALS  E E+
Sbjct: 121 EEAQRVIDRLGAQFSAWDLVSRLSIAEQQQVEIARALQRNSRILVMDEPTAALSNRETEQ 180

Query: 186 LFTIVRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEAIVAKMVG 245
           LF ++++LR   +AI++I+HR+ EV+ L+ RV+++RDG  V       LN   +V  MVG
Sbjct: 181 LFALIKRLRSEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDQLNASELVRMMVG 240

Query: 246 RDLETFYPKAERPP-GEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARA 304
           R L   + K    P G++RL+V  LT  G     S  VRAGEIV LAGLVGAGRSE+A+ 
Sbjct: 241 RPLSDLFNKDRAIPLGDIRLAVNHLTDGGKVHPSSLAVRAGEIVGLAGLVGAGRSELAQL 300

Query: 305 IFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLG 364
           IFG+     GEIWI G+++T   P  A+  G+  + E+R++QGL LE++   N  M  L 
Sbjct: 301 IFGVHKPKEGEIWIDGEKVTIHSPRDAIARGIGFLTENRKEQGLFLEMAAQENIVMATLE 360

Query: 365 RLVKHGLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLI 424
           R   +G+++ R    +AN+    L ++        G LSGGNQQK+++ +W+A GP++LI
Sbjct: 361 RDASYGMLNRRKGQTIANEAIASLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPRILI 420

Query: 425 IDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIA 484
           +DEPTRG+DVGAK+E+Y  + E+ R G+A+LMISSELPEV+GM+DRV VMHEG I  ++ 
Sbjct: 421 LDEPTRGVDVGAKSEIYRMMQEMARQGVAILMISSELPEVVGMSDRVYVMHEGTIVGELE 480

Query: 485 RADADEERIMGAALG 499
            +   +E IM  A G
Sbjct: 481 GSHISQENIMTLATG 495



 Score = 96.3 bits (238), Expect = 2e-24
 Identities = 73/248 (29%), Positives = 123/248 (49%), Gaps = 14/248 (5%)

Query: 264 LSVRGLTR-VGVF---KDISFDVRAGEIVALAGLVGAGRSEVARAIFGIDPLDSGEIWIA 319
           L +RG+TR  G F   K +   V  GE+ AL G  GAG+S + + + G     SGEI I 
Sbjct: 7   LEMRGITRRFGNFYALKGVDLTVWPGEVHALMGENGAGKSTLMKILAGAYTASSGEILIE 66

Query: 320 GKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLGRLVKHGLISARSETQ 379
           GK      P  A+ AG+ L+ ++     LA  L++A N  +     +   GL+  R   +
Sbjct: 67  GKPWALKGPKEALAAGITLIYQEIN---LAPNLTVAENIFLG--SEIAPGGLVKRRQMAE 121

Query: 380 LANQWGTRL--RLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPKVLIIDEPTRGIDVGAK 437
            A +   RL  +  A D    V  LS   QQ+V + + L    ++L++DEPT  +     
Sbjct: 122 EAQRVIDRLGAQFSAWDL---VSRLSIAEQQQVEIARALQRNSRILVMDEPTAALSNRET 178

Query: 438 AEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIARADADEERIMGAA 497
            ++++ +  L  +GMA++ IS  + EV  ++DRV V+ +G+    + R   +   ++   
Sbjct: 179 EQLFALIKRLRSEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDQLNASELVRMM 238

Query: 498 LGQPMPPL 505
           +G+P+  L
Sbjct: 239 VGRPLSDL 246