Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 502 a.a., sugar ABC transporter ATPase from Cupriavidus basilensis FW507-4G11

 Score =  425 bits (1093), Expect = e-123
 Identities = 237/496 (47%), Positives = 317/496 (63%), Gaps = 3/496 (0%)

Query: 1   MQQPTSAVPRLELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVH 60
           M   T   P  E+R   K+F  V+AL D   A++PGEVH LLGENGAGKS+++K+L GV+
Sbjct: 1   MNAITEITPLFEMRGICKNFPGVKALDDVSFAIYPGEVHMLLGENGAGKSSLMKVLCGVY 60

Query: 61  QPDTGELVVDGEARRFATPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRI-GRI 119
             D GE   DG      +PA+    G+AVI+QE +L   L IA+NIF+GR+P  RI G +
Sbjct: 61  VADAGEFYHDGSPVAITSPADTMGLGIAVIFQEFSLVPYLDIAQNIFLGREPRGRIPGSV 120

Query: 120 QYDAMRREVDGLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAALS 179
               M  E   +L  LG+++     V  L +A QQ++EIAKALS NA +L++DEPTAALS
Sbjct: 121 DAARMHAEARRILDILGMEVSTRTPVHRLGVAQQQMVEIAKALSQNARILVLDEPTAALS 180

Query: 180 LPEVERLFTIVRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEAI 239
             E E+LF ++ +L+   V++++I+HR+ EVFAL  R+TI+RDG KV   L  D   + +
Sbjct: 181 DRETEKLFAVIARLKADGVSMIYISHRMAEVFALGDRITILRDGRKVGACLPGDATPDEL 240

Query: 240 VAKMVGRDLETFYPKAERP-PGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGR 298
           VA+MVGR ++  Y +     PGEV L VR ++      DI+  VRAGEIV LAGLVG+GR
Sbjct: 241 VARMVGRKVDMSYSRERSAQPGEVALDVRNVSADSGIADINLQVRAGEIVGLAGLVGSGR 300

Query: 299 SEVARAIFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNA 358
           SEVARA+FG DP+  GEI+I GKRLT G P  A   G AL+PE R+ +GLAL  ++  N 
Sbjct: 301 SEVARAVFGADPIRQGEIYIFGKRLTGG-PDRARELGAALIPESRKSEGLALIRTVRDNL 359

Query: 359 SMTVLGRLVKHGLISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLAT 418
            +  L R        A     LA +   RLR+   D N     LSGGNQQK+V+GKWL  
Sbjct: 360 LLAGLRRAFPARWYRADKAEALAEREIARLRIATPDGNQLAQFLSGGNQQKIVIGKWLVA 419

Query: 419 GPKVLIIDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGR 478
             K+ I DEPTRGIDVGAKAE+++ +  LV+ G  VL+ISSELPE++ + DR  VM  GR
Sbjct: 420 EAKLFIFDEPTRGIDVGAKAEIFALIDSLVKQGAGVLLISSELPEIINVCDRTYVMRGGR 479

Query: 479 ISADIARADADEERIM 494
           I+ ++A A+  EERI+
Sbjct: 480 IAGEVAHAEMTEERIL 495



 Score = 87.8 bits (216), Expect = 8e-22
 Identities = 64/246 (26%), Positives = 115/246 (46%), Gaps = 10/246 (4%)

Query: 258 PPGEVRLSVRGLTRVGVFKDISFDVRAGEIVALAGLVGAGRSEVARAIFGIDPLDSGEIW 317
           P  E+R   +    V    D+SF +  GE+  L G  GAG+S + + + G+   D+GE +
Sbjct: 9   PLFEMRGICKNFPGVKALDDVSFAIYPGEVHMLLGENGAGKSSLMKVLCGVYVADAGEFY 68

Query: 318 IAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTVLGRLVKHGLISARSE 377
             G  +    PA  +  G+A++ ++     L   L IA+N     LGR  + G I    +
Sbjct: 69  HDGSPVAITSPADTMGLGIAVIFQEF---SLVPYLDIAQNI---FLGREPR-GRIPGSVD 121

Query: 378 TQLANQWGTRLRLKAG---DPNAPVGTLSGGNQQKVVLGKWLATGPKVLIIDEPTRGIDV 434
               +    R+    G       PV  L    QQ V + K L+   ++L++DEPT  +  
Sbjct: 122 AARMHAEARRILDILGMEVSTRTPVHRLGVAQQQMVEIAKALSQNARILVLDEPTAALSD 181

Query: 435 GAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISADIARADADEERIM 494
               ++++ +A L  DG++++ IS  + EV  + DR+ ++ +GR        DA  + ++
Sbjct: 182 RETEKLFAVIARLKADGVSMIYISHRMAEVFALGDRITILRDGRKVGACLPGDATPDELV 241

Query: 495 GAALGQ 500
              +G+
Sbjct: 242 ARMVGR 247