Pairwise Alignments

Query, 509 a.a., D-ribose transporter ATP binding protein from Burkholderia phytofirmans PsJN

Subject, 515 a.a., inositol transport ATP-binding protein IatA from Caulobacter crescentus NA1000

 Score =  424 bits (1089), Expect = e-123
 Identities = 236/493 (47%), Positives = 321/493 (65%), Gaps = 10/493 (2%)

Query: 11  LELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVHQPDTGELVVD 70
           L++   SKSF  VRAL   DL +  GEVHALLGENGAGKST++KIL+  H  D G +   
Sbjct: 4   LDVSQVSKSFPGVRALDQVDLVVGVGEVHALLGENGAGKSTLIKILSAAHAADAGTVTFA 63

Query: 71  GEARRFA-TPAEARDAGLAVIYQEPTLFFDLSIAENIFMGRQPVDRIGRIQYDAMRREVD 129
           G+       P   +  G+A IYQE  LF +LS+AEN+++GR+P  R+G + +  +R +  
Sbjct: 64  GQVLDPRDAPLRRQQLGIATIYQEFNLFPELSVAENMYLGREP-RRLGLVDWSRLRADAQ 122

Query: 130 GLLASLGVDLRADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAALSLPEVERLFTI 189
            LL  LG+ L  D  VRGL++A+QQ++EIAKA++LNA ++IMDEPTAALS  EV+RL  I
Sbjct: 123 ALLNDLGLPLNPDAPVRGLTVAEQQMVEIAKAMTLNARLIIMDEPTAALSGREVDRLHAI 182

Query: 190 VRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEAIVAKMVGRDLE 249
           +  L+ R V++++++HRL EV A+  R T+MRDG  V  G   D+    +V  MVGR +E
Sbjct: 183 IAGLKARSVSVIYVSHRLGEVKAMCDRYTVMRDGRFVASGDVADVEVADMVRLMVGRHVE 242

Query: 250 TFYPKAERPPGEVRLSVRGLTRV-------GVFKDISFDVRAGEIVALAGLVGAGRSEVA 302
               K  RPPG V L V G+T         G  + +SF  R GEIV LAGLVGAGR+++A
Sbjct: 243 FERRKRRRPPGAVVLKVEGVTPAAPRLSAPGYLRQVSFAARGGEIVGLAGLVGAGRTDLA 302

Query: 303 RAIFGIDPLDSGEIWIAGKRLTAGRPAAAVRAGLALVPEDRRQQGLALELSIARNASMTV 362
           R IFG DP+ +G + +  K L    P  A++AG+ LVPEDR+QQG  L+ SI RN S+  
Sbjct: 303 RLIFGADPIAAGRVLVDDKPLRLRSPRDAIQAGIMLVPEDRKQQGCFLDHSIRRNLSLPS 362

Query: 363 LGRLVKHG-LISARSETQLANQWGTRLRLKAGDPNAPVGTLSGGNQQKVVLGKWLATGPK 421
           L  L   G  +  R+E  L   +  +LR+K  D    +G LSGGNQQKV+LG+ +A  PK
Sbjct: 363 LKALSALGQWVDERAERDLVETYRQKLRIKMADAETAIGKLSGGNQQKVLLGRAMALTPK 422

Query: 422 VLIIDEPTRGIDVGAKAEVYSALAELVRDGMAVLMISSELPEVLGMADRVLVMHEGRISA 481
           VLI+DEPTRGID+GAKAEV+  L++L   G+AV++ISSEL EV+ ++DR++V  EG I A
Sbjct: 423 VLIVDEPTRGIDIGAKAEVHQVLSDLADLGVAVVVISSELAEVMAVSDRIVVFREGVIVA 482

Query: 482 DIARADADEERIM 494
           D+    A EE +M
Sbjct: 483 DLDAQTATEEGLM 495



 Score = 80.9 bits (198), Expect = 1e-19
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 5   TSAVPRLELRHASKSFGRVRALSDGDLALWPGEVHALLGENGAGKSTVVKILAGVHQPDT 64
           T A PRL         G +R +S    A   GE+  L G  GAG++ + +++ G      
Sbjct: 263 TPAAPRLSAP------GYLRQVS---FAARGGEIVGLAGLVGAGRTDLARLIFGADPIAA 313

Query: 65  GELVVDGEARRFATPAEARDAGLAVIYQEPT---LFFDLSIAENIFM-GRQPVDRIGR-I 119
           G ++VD +  R  +P +A  AG+ ++ ++      F D SI  N+ +   + +  +G+ +
Sbjct: 314 GRVLVDDKPLRLRSPRDAIQAGIMLVPEDRKQQGCFLDHSIRRNLSLPSLKALSALGQWV 373

Query: 120 QYDAMRREVDGLLASLGVDLR-ADQLVRGLSIADQQVIEIAKALSLNANVLIMDEPTAAL 178
              A R  V+     L + +  A+  +  LS  +QQ + + +A++L   VLI+DEPT  +
Sbjct: 374 DERAERDLVETYRQKLRIKMADAETAIGKLSGGNQQKVLLGRAMALTPKVLIVDEPTRGI 433

Query: 179 SLPEVERLFTIVRKLRERDVAILFITHRLDEVFALTQRVTIMRDGAKVFDGLTTDLNTEA 238
            +     +  ++  L +  VA++ I+  L EV A++ R+ + R+G  V D        E 
Sbjct: 434 DIGAKAEVHQVLSDLADLGVAVVVISSELAEVMAVSDRIVVFREGVIVADLDAQTATEEG 493

Query: 239 IVAKMVGRDLETFYPKAER 257
           ++A M         P  ER
Sbjct: 494 LMAYMATGTDRVAAPDMER 512