Pairwise Alignments

Query, 667 a.a., RNase II stability modulator from Burkholderia phytofirmans PsJN

Subject, 948 a.a., hypothetical protein from Herbaspirillum seropedicae SmR1

 Score =  340 bits (871), Expect = 2e-97
 Identities = 178/442 (40%), Positives = 278/442 (62%), Gaps = 4/442 (0%)

Query: 223 DITEERLAQERLTQLANTDSLTGLANRNAIQDKIRAAIEDAA-PGEAVGVLFLDLDNFKK 281
           DIT  +  +  L   A+ D+LTGL NR+ ++  +  AI  A    +A+ V+F+DLD FK 
Sbjct: 504 DITSMKRYEAELEFQASRDTLTGLINRHMLRHHLEQAIGVAERQKQALWVVFVDLDRFKF 563

Query: 282 VNDHYGHVFGDRLIRDVSSAISECLNEGDTLARLGGDEFIVLAAKGTAHELETTA-QRIL 340
           VND  GH  GD L+R V+  +   + E DT+ARLGGDEFI++  +     L+T + QRI+
Sbjct: 564 VNDTLGHKAGDTLLRTVAGRLRAAVREADTVARLGGDEFIMILPEQDELTLDTRSLQRIM 623

Query: 341 ERMRTPFALGLVEVYTGCSIGIARYPEHGDSLESLIRSADTAMYVAKDEGKRTHRVFSPE 400
           + +  P  LG   ++  CS+G+A YP  G   E+LI+ AD AMY  K  G+   + ++P 
Sbjct: 624 DAVAAPVTLGGHTLFMTCSVGVACYPNDGTDGETLIKHADIAMYRGKQTGRNNFQFYTPA 683

Query: 401 MNRRVAEYMWLDTNLRRGLEEGQLTLHYQPKLSLATGVVQGVEALVRWNSPERGQIMPSE 460
           MN +  E + ++ +LR  L+ G+  LHYQPK+ LA+G V G EAL+RW  P+ G + P+ 
Sbjct: 684 MNEQALERLRIEGDLRNALDHGEFLLHYQPKVDLASGRVIGSEALIRWQHPQLGMVSPAR 743

Query: 461 FIRYAEESGLIGVLGRWVMETAAKQAAKWKADGY-NLRIAINVSARQLVDTAVVRHFSEA 519
           FI  AEE+GLI  +G WV+  A  Q  +W+  GY ++ +++N+S  Q +   +V   ++ 
Sbjct: 744 FIGLAEETGLILPIGAWVLRAACTQCRQWQLGGYADISVSVNLSVGQFLQKDLVSSIADV 803

Query: 520 LQNARLDPCLIDLELTESCLIEDETAAIDLIRQFRQLGAQVHLDDFGTGYSSLSQLGRIP 579
           L++  L P  ++LELTES ++ D   AI ++   ++LG ++ +DDFGTGYSSL+ L R P
Sbjct: 804 LEDTGLPPESLELELTESLMMTDVEHAIGILAGLKKLGVRLSIDDFGTGYSSLAYLKRFP 863

Query: 580 LDVIKLDRSFVRSINADTKAQALVRSMVAVAQELNFKVVAEGIETESEEVFMKGLGVDYV 639
           +DV+K+DRSFVR I  D    A+  S++++A+ L  +V+AEG+ET+ +  +++  G D +
Sbjct: 864 IDVLKIDRSFVRDITIDADDAAITASIISLARHLKLRVIAEGVETDEQLDYLRHYGCDEI 923

Query: 640 QGFLYGQAMPAAEFERWL-QDR 660
           QG+L+   +PA +FE+ L QDR
Sbjct: 924 QGYLFSPPVPADKFEQILRQDR 945