Pairwise Alignments

Query, 663 a.a., ATPase AAA from Burkholderia phytofirmans PsJN

Subject, 673 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas fluorescens FW300-N1B4

 Score =  253 bits (645), Expect = 3e-71
 Identities = 167/400 (41%), Positives = 229/400 (57%), Gaps = 36/400 (9%)

Query: 183 YSLGAVEEAFERSVELARVSRQKESKRV--RLNTIVAHLRDGVAAFDDAGQVEAVNPAML 240
           ++LG V+ A E       VSRQ   + +     T++  L +G+   D+ G ++A+N    
Sbjct: 203 HTLGTVQAAAEA------VSRQMALQALLEEQQTVLEVLNEGLVVLDERGCIKALNRYAR 256

Query: 241 DLLGLDREQ-----DVPAQVERAVGPLLR-------ETIEHNLPIEERIEQIGGRALIVN 288
            L  + R+          Q E     LLR       E I  +L     +      A +V+
Sbjct: 257 QLFRVGRDLLGSPFQRLGQSELTDEILLRGGKGQQYEGIR-DLDCTFELHDRSHLACLVS 315

Query: 289 CVPIVEQGVRSGSVITLQDALVAQRIDRSLRTSQRPKHLVARHQLDDLIGNSAALERVRR 348
             P+ EQG   G +++L++    + I R +  +Q      A +  + + G+S A++    
Sbjct: 316 VCPL-EQG---GRIVSLRENRRIREITRRIIGTQ------ASYTFETIQGSSRAIQDALH 365

Query: 349 LARAGAAHDATVLLSGESGTGKELVAQGIHNASRRRGNPFVAFNCAALPEGLIESELFGH 408
           L +  +  D+T L+ GESGTGKEL AQ IHNAS R   PFVA NC A+P  L++SELFGH
Sbjct: 366 LGKIASRSDSTTLILGESGTGKELFAQAIHNASERCNGPFVAVNCGAIPRDLVQSELFGH 425

Query: 409 EEGAFTGARRGGKPGLFEIAHTGTIFLDEIGEMPAALQSRLLRVLQEREVMKLGSGRATP 468
            EGAFTG+ RGG  G FE+A  GTIFLDEIG+M    Q  LLRVLQE EV ++G+ ++  
Sbjct: 426 VEGAFTGSARGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEVTRVGAKKSQQ 485

Query: 469 VDVRVIAATHRDLHALVEQGAFRADLYFRLNLLQLKLPPLRDRRDDVPQLARYLLSRSAL 528
           VDVR+IAATHR+L   V  GAFR DLY+RLN+L L +PPLR RR+DVP LAR+ L+R A 
Sbjct: 486 VDVRIIAATHRNLSQAVADGAFREDLYYRLNVLNLTVPPLRMRREDVPLLARHFLNRCAR 545

Query: 529 QYGLT-EGASERVLAFLAPLFEHYAWPGNVRELENLLTRA 567
               + +G S   L  L+     Y+WPGNVRELEN + RA
Sbjct: 546 SLRKSVQGISPEALDILSA----YSWPGNVRELENTIERA 581